RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 PLEKHH3Q7Z736 793 aa8.68□□□□□ -1.02
SHC4-204ENST00000557797 ZFPM1Q8IX07 1006 aa8.68□□□□□ -1.02
SHC4-204ENST00000557797 TBC1D32Q96NH3 1257 aa8.68□□□□□ -1.02
SHC4-204ENST00000557797 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.68□□□□□ -1.02
SHC4-204ENST00000557797 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
SHC4-204ENST00000557797 FLRT1Q9NZU1 646 aa8.68□□□□□ -1.02
SHC4-204ENST00000557797 SAMM50Q9Y512 469 aa8.68□□□□□ -1.02
SHC4-204ENST00000557797 LRRFIP2Q9Y608 721 aaKnown RBP8.68□□□□□ -1.02
SHC4-204ENST00000557797 RFX7Q2KHR2 1363 aa8.68□□□□□ -1.02
SHC4-204ENST00000557797 PTPRZ1P23471 2315 aaPredicted RBP8.68□□□□□ -1.02
SHC4-204ENST00000557797 VPS13AQ96RL7 3174 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 KIAA1324LA8MWY0 1029 aaPredicted RBP8.67□□□□□ -1.02
SHC4-204ENST00000557797 GRXCR1A8MXD5 290 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 PLIN1O60240 522 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 ENTPD3O75355 529 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 HOXC6P09630 235 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 CTSHP09668 335 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 CYBAP13498 195 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 HMGCS2P54868 508 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 HERVK_113P62684 666 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 SPP2Q13103 211 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 MRPL58Q14197 206 aaKnown RBP8.67□□□□□ -1.02
SHC4-204ENST00000557797 TTLL4Q14679 1199 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 MEI1Q5TIA1 1274 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 LLGL2Q6P1M3 1020 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 CCDC129Q6ZRS4 1044 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 CCDC84Q86UT8 332 aaPredicted RBP8.67□□□□□ -1.02
SHC4-204ENST00000557797 TRPV1Q8NER1 839 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 EDC3Q96F86 508 aaKnown RBP8.67□□□□□ -1.02
SHC4-204ENST00000557797 IDI2Q9BXS1 227 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 CHMP4AQ9BY43 222 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 BACH2Q9BYV9 841 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 PORCNQ9H237 461 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 CD320Q9NPF0 282 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
SHC4-204ENST00000557797 BAHCC1Q9P281 2608 aa8.67□□□□□ -1.02
SHC4-204ENST00000557797 RIF1Q5UIP0 2472 aaKnown RBP8.66□□□□□ -1.02
SHC4-204ENST00000557797 PKD1L2Q7Z442 2459 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 A0A0G2JMZ2 1700 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 CHD8Q9HCK8 2581 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 FAM170BA6NMN3 283 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 COBLO75128 1261 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 ZNF853P0CG23 659 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 CNGA1P29973 690 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 ADCYAP1R1P41586 468 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 ERVK-24P63145 666 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 IRX3P78415 501 aaPredicted RBP8.66□□□□□ -1.02
SHC4-204ENST00000557797 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
SHC4-204ENST00000557797 PSMD2Q13200 908 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 TMEM240Q5SV17 173 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 CCDC30Q5VVM6 783 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 CCDC174Q6PII3 467 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 C16orf59Q7L2K0 433 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 VPS37DQ86XT2 251 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 SLC28A3Q9HAS3 691 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 MRS2Q9HD23 443 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 CNNM1Q9NRU3 951 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 RBPJLQ9UBG7 517 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 MSRAQ9UJ68 235 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 ZNF236Q9UL36 1845 aa8.66□□□□□ -1.02
SHC4-204ENST00000557797 CHD6Q8TD26 2715 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 SCAMP3O14828 347 aaKnown RBP8.65□□□□□ -1.02
SHC4-204ENST00000557797 PEX10O60683 326 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 FRAT2O75474 233 aaPredicted RBP8.65□□□□□ -1.02
SHC4-204ENST00000557797 SPINK2P20155 84 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 NTF4P34130 210 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 RGS3P49796 1198 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 HNRNPUQ00839 825 aaKnown RBP eCLIP8.65□□□□□ -1.02
SHC4-204ENST00000557797 LRRC14Q15048 493 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 LRRC41Q15345 812 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 ANKRD33Q7Z3H0 272 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 GAL3ST3Q96A11 431 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 TOX2Q96NM4 488 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 MYH16Q9H6N6 1097 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 PIDD1Q9HB75 910 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 CYP8B1Q9UNU6 501 aa8.65□□□□□ -1.02
SHC4-204ENST00000557797 ZNF521Q96K83 1311 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 KIF16BQ96L93 1317 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 SLC15A5A6NIM6 579 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 SEPT4O43236 478 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 GLRX3O76003 335 aaKnown RBP8.64□□□□□ -1.03
SHC4-204ENST00000557797 TIMP1P01033 207 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 ALADP13716 330 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 CYP2C19P33261 490 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 RING1Q06587 406 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 PPIGQ13427 754 aaKnown RBP eCLIP8.64□□□□□ -1.03
SHC4-204ENST00000557797 CCDC57Q2TAC2 916 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 CAVIN4Q5BKX8 364 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 SCARA3Q6AZY7 606 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 TTBK2Q6IQ55 1244 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 MFSD5Q6N075 450 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 CCAR1Q8IX12 1150 aaKnown RBP8.64□□□□□ -1.03
SHC4-204ENST00000557797 SMYD4Q8IYR2 804 aaPredicted RBP8.64□□□□□ -1.03
SHC4-204ENST00000557797 SLC44A5Q8NCS7 719 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 FERMT2Q96AC1 680 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 OSBPL1AQ9BXW6 950 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 OSBPL5Q9H0X9 879 aaPredicted RBP8.64□□□□□ -1.03
SHC4-204ENST00000557797 NKX2-4Q9H2Z4 354 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
SHC4-204ENST00000557797 USP40Q9NVE5 1235 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms