RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PRDM7Q9NQW5 492 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 DLL4Q9NR61 685 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 ZC3H12DA2A288 527 aaKnown RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 F8W031 263 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CYP7B1O75881 506 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 PRLP01236 227 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 C8BP07358 591 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 PFKMP08237 780 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 COL6A1P12109 1028 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 NEK2P51955 445 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 MESP2Q0VG99 397 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 MTMR1Q13613 665 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CT47A1Q5JQC4 288 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 TMEM200BQ69YZ2 307 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 ETV3LQ6ZN32 361 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 BMP8AQ7Z5Y6 402 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 TCEAL8Q8IYN2 117 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 C1orf162Q8NEQ5 155 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CEP89Q96ST8 783 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 CNTD2Q9H8S5 307 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 GCM1Q9NP62 436 aa2.36□□□□□ -2.03
HIF1A-212ENST00000557538 PNMA8BQ9ULN7 279 aaPredicted RBP2.36□□□□□ -2.03
HIF1A-212ENST00000557538 THBS2P35442 1172 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 MEF2AQ02078 507 aaPredicted RBP2.35□□□□□ -2.03
HIF1A-212ENST00000557538 KIR3DS1Q14943 382 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 KCNMB1Q16558 191 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 FSCN1Q16658 493 aaKnown RBP2.35□□□□□ -2.03
HIF1A-212ENST00000557538 ZNF827Q17R98 1081 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 BROXQ5VW32 411 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 KANK2Q63ZY3 851 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 DPP8Q6V1X1 898 aaPredicted RBP2.35□□□□□ -2.03
HIF1A-212ENST00000557538 ESPNLQ6ZVH7 1005 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 FERMT3Q86UX7 667 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 REXO1L1PQ8IX06 675 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 NXPE1Q8N323 547 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 POU5F2Q8N7G0 328 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 CNTD1Q8N815 330 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 KRTAP17-1Q9BYP8 105 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 ZNF700Q9H0M5 742 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 CDH19Q9H159 772 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 SHTN1A0MZ66 631 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 COL6A2P12110 1019 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 ENPP1P22413 925 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 VIPR1P32241 457 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 ID4P47928 161 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 MANFP55145 182 aaKnown RBP2.35□□□□□ -2.03
HIF1A-212ENST00000557538 IL2P60568 153 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 TTC38Q5R3I4 469 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 TMEFF1Q8IYR6 380 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 FAM43AQ8N2R8 423 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 Q8N3U1 123 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 C19orf44Q9H6X5 657 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 THG1LQ9NWX6 298 aaKnown RBP2.35□□□□□ -2.03
HIF1A-212ENST00000557538 GALNT8Q9NY28 637 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 SCOCQ9UIL1 159 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 VWA7Q9Y334 891 aa2.35□□□□□ -2.03
HIF1A-212ENST00000557538 N4BP3O15049 544 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 ALDH1L1O75891 902 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 SEC24DO94855 1032 aaPredicted RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 MTHFD2P13995 350 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 PFKLP17858 780 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 TRHRP34981 398 aaPredicted RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 ECE1P42892 770 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 CDR1P51861 262 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 DLX2Q07687 328 aaPredicted RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 C19orf54Q5BKX5 351 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 CD276Q5ZPR3 534 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 LDHDQ86WU2 507 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 CILP2Q8IUL8 1156 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 LYSMD2Q8IV50 215 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 CMTR2Q8IYT2 770 aaKnown RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 ARRDC4Q8NCT1 418 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 FUBP3Q96I24 572 aaKnown RBP eCLIP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 KCNJ15Q99712 375 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 PTPN18Q99952 460 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 MCOLN1Q9GZU1 580 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 PPM1GO15355 546 aaPredicted RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 MTSS1O43312 755 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 PTGS1P23219 599 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 ADKP55263 362 aaKnown RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 STRN3Q13033 797 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 RAB3GAP1Q15042 981 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 MILR1Q7Z6M3 343 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 ZC3H18Q86VM9 953 aaKnown RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 IGDCC3Q8IVU1 814 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 CISD2Q8N5K1 135 aaKnown RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 FBXO15Q8NCQ5 510 aaPredicted RBP2.34□□□□□ -2.03
HIF1A-212ENST00000557538 FAXDC2Q96IV6 333 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 CHAMP1Q96JM3 812 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 PPP1R16BQ96T49 567 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 AMNQ9BXJ7 453 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 KCND1Q9NSA2 647 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 KCNG1Q9UIX4 513 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 TNKSO95271 1327 aa2.34□□□□□ -2.03
HIF1A-212ENST00000557538 NFIBO00712 420 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 HRGP04196 525 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 S100BP04271 92 aaPredicted RBP2.34□□□□□ -2.04
HIF1A-212ENST00000557538 CYP2C8P10632 490 aa2.34□□□□□ -2.04
HIF1A-212ENST00000557538 RECQLP46063 649 aaPredicted RBP2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms