RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 EVPLQ92817 2033 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 COL1A2P08123 1366 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 KIAA0355O15063 1070 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 TREHO43280 583 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 HBP1O60381 514 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 STBD1O95210 358 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 BMP15O95972 392 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 P4HBP07237 508 aaKnown RBP16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 DDIT3P35638 169 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 QARSP47897 775 aaKnown RBP16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 PSMC5P62195 406 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 IGBP1P78318 339 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 CEBPZQ03701 1054 aaKnown RBP16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 CTTNQ14247 550 aaKnown RBP16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 BBXQ8WY36 941 aaPredicted RBP16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 DHX38Q92620 1227 aaKnown RBP16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 WNT8BQ93098 351 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 FAM167AQ96KS9 214 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
VIPAS39-210ENST00000557466 LOXHD1Q8IVV2 1947 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 TMEM150BA6NC51 233 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 ZBTB42B2RXF5 422 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 ITGB8P26012 769 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 MARCH8Q5T0T0 291 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 ARL6IP4Q66PJ3 421 aaKnown RBP16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 DTHD1Q6ZMT9 781 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 NEK9Q8TD19 979 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 ZBTB10Q96DT7 871 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 HSD17B14Q9BPX1 270 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 NOC4LQ9BVI4 516 aaKnown RBP16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 PPP1R12CQ9BZL4 782 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 PRKAG2Q9UGJ0 569 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 SEPT9Q9UHD8 586 aaPredicted RBP16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 TUBE1Q9UJT0 475 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 TCHHQ07283 1943 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
VIPAS39-210ENST00000557466 VWA3AA6NCI4 1184 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 RRN3P2A6NIE6 340 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 PP2D1A8MPX8 630 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 H0YGN5 161 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 MED24O75448 989 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 SLITRK3O94933 977 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 GNAT1P11488 350 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 PTK7Q13308 1070 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 XKR3Q5GH77 459 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 SERINC5Q86VE9 423 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 C4orf19Q8IY42 314 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 TNPO1Q92973 898 aaKnown RBP16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 HIPK3Q9H422 1215 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
VIPAS39-210ENST00000557466 MBLAC1A4D2B0 266 aaPredicted RBP16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 DKC1O60832 514 aaKnown RBP eCLIP16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 SPATA31C1P0DKV0 1188 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 RAG1P15918 1043 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 GRIN1Q05586 938 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 TRIM71Q2Q1W2 868 aaKnown RBP16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 ZNF484Q5JVG2 852 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 PLA2G4FQ68DD2 849 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 RUFY4Q6ZNE9 571 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 ANO5Q75V66 913 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 TPH2Q8IWU9 490 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 ERMNQ8TAM6 284 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 ZSWIM4Q9H7M6 989 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 NRBP2Q9NSY0 501 aa16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 TFIP11Q9UBB9 837 aaKnown RBP16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
VIPAS39-210ENST00000557466 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 LYPLA2O95372 231 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 C22orf31O95567 290 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 MARCKSP29966 332 aaPredicted RBP16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 CDC25AP30304 524 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 CYP2C18P33260 490 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 RBL2Q08999 1139 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 PDIA5Q14554 519 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 TARBP2Q15633 366 aaKnown RBP16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 MTERF2Q49AM1 385 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 HAUS3Q68CZ6 603 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 MTHFD1LQ6UB35 978 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 CATSPER3Q86XQ3 398 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 SNX29Q8TEQ0 813 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 CHAMP1Q96JM3 812 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 SH2D3AQ9BRG2 576 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 POLR3CQ9BUI4 534 aaPredicted RBP16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 NIFKQ9BYG3 293 aaKnown RBP16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 WNT8AQ9H1J5 351 aa16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 FBXO2Q9UK22 296 aaPredicted RBP16.63■□□□□ 0.25
VIPAS39-210ENST00000557466 ZBTB39O15060 712 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 TIMP1P01033 207 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 KLRC1P26715 233 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 RPA1P27694 616 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 YWHABP31946 246 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms