RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 GDF15Q99988 308 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 UBE2OQ9C0C9 1292 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 WNT8AQ9H1J5 351 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 TTC12Q9H892 705 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-232ENST00000557442 EML1O00423 815 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 HBP1O60381 514 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 INSRRP14616 1297 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 CSF2RAP15509 400 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 PRKCEQ02156 737 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 SPIRE1Q08AE8 756 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 RETREG2Q8NC44 543 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 TRAPPC12Q8WVT3 735 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 WNT8BQ93098 351 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 SCLYQ96I15 445 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 FAM167AQ96KS9 214 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 MTMR9Q96QG7 549 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 PCDHB6Q9Y5E3 794 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 COL1A2P08123 1366 aa11.9□□□□□ -0.5
HNRNPC-232ENST00000557442 POTEMA6NI47 508 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 RRN3P2A6NIE6 340 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 ZNF862O60290 1169 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 OATP04181 439 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 ATP4AP20648 1035 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 THPOP40225 353 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 ADAM17P78536 824 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 PPIGQ13427 754 aaKnown RBP eCLIP11.89□□□□□ -0.511e-9■□□□□ 9.6
HNRNPC-232ENST00000557442 LRRC8DQ7L1W4 858 aa11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 SEPT9Q9UHD8 586 aaPredicted RBP11.89□□□□□ -0.51
HNRNPC-232ENST00000557442 MBLAC1A4D2B0 266 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 STX6O43752 255 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 CTSHP09668 335 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 CKBP12277 381 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 SELPP16109 830 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 BMP8BP34820 402 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 QARSP47897 775 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 PSMC5P62195 406 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 CYP4A11Q02928 519 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 RBL2Q08999 1139 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 PTGDRQ13258 359 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 TMEM266Q2M3C6 531 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 TRIM71Q2Q1W2 868 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 MARCH8Q5T0T0 291 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 RUFY4Q6ZNE9 571 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 ZBTB10Q96DT7 871 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 LXNQ9BS40 222 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 PRO3102Q9H379 93 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 CEP131Q9UPN4 1083 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 MTMR6Q9Y217 621 aa11.88□□□□□ -0.51
HNRNPC-232ENST00000557442 ZBTB42B2RXF5 422 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 LAD1O00515 517 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 CAND2O75155 1236 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 P4HBP07237 508 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 IQCF3P0C7M6 154 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 ACRP10323 421 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 TECP42680 631 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 EPHB4P54760 987 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 RESTQ13127 1097 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 BECN1Q14457 450 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 EPHA7Q15375 998 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 ZNF484Q5JVG2 852 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 ZNF618Q5T7W0 954 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 MTHFD1LQ6UB35 978 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 DEFB128Q7Z7B8 93 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 RSPH3Q86UC2 560 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 TDHQ8IZJ6 230 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 NEK9Q8TD19 979 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 DYDC2Q96IM9 177 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 EIF2AK1Q9BQI3 630 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 FAM49AQ9H0Q0 323 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 IL23AQ9NPF7 189 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 NRBP2Q9NSY0 501 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 RGL1Q9NZL6 768 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
HNRNPC-232ENST00000557442 TMEM150BA6NC51 233 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 C22orf31O95567 290 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 KLRC1P26715 233 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 RFC2P35250 354 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 CTTNQ14247 550 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 MTERF2Q49AM1 385 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 C9orf50Q5SZB4 431 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 PSRC1Q6PGN9 363 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 TPH2Q8IWU9 490 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 C4orf32Q8N8J7 132 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 DNAJB3Q8WWF6 145 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 WRAP73Q9P2S5 460 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 PCDHA2Q9Y5H9 948 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms