RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 ZNF174Q15697 407 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 IL17AQ16552 155 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 SGSM1Q2NKQ1 1148 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 SPICE1Q8N0Z3 855 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 SCFD2Q8WU76 684 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 NAF1Q96HR8 494 aaKnown RBP11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 MPP4Q96JB8 637 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 CNOT6LQ96LI5 555 aaKnown RBP11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 NEUROG2Q9H2A3 272 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 RGL1Q9NZL6 768 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 SLC45A1Q9Y2W3 748 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 TACC3Q9Y6A5 838 aa11.41□□□□□ -0.58
SUPT16H-207ENST00000557394 DPPA5A6NC42 116 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 F8VZ95 297 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 VIMP08670 466 aaKnown RBP11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 ATP2A2P16615 1042 aaKnown RBP11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 CLK1P49759 484 aaKnown RBP11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 EIF3BP55884 814 aaKnown RBP11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 PKN1Q16512 942 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 ARMC3Q5W041 872 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 TMC3Q7Z5M5 1100 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 NT5DC4Q86YG4 428 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 MDM1Q8TC05 714 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 NUP133Q8WUM0 1156 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 EZH1Q92800 747 aaPredicted RBP11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 PCMTD1Q96MG8 357 aaPredicted RBP11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 CNNM2Q9H8M5 875 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 ARHGEF3Q9NR81 526 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 PICK1Q9NRD5 415 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 ABCF3Q9NUQ8 709 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 ADAM22Q9P0K1 906 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 LRRC42Q9Y546 428 aa11.4□□□□□ -0.58
SUPT16H-207ENST00000557394 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 BUB1O43683 1085 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 PALMO75781 387 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 OAS1P00973 400 aaKnown RBP11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 MYL1P05976 194 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 CD53P19397 219 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 CCNE1P24864 410 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 SMARCA1P28370 1054 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 CNGA1P29973 690 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 PPARDQ03181 441 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 MAP3K12Q12852 859 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 UBE3CQ15386 1083 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 KRT71Q3SY84 523 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 FAM133BQ5BKY9 247 aaKnown RBP11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 AKNAD1Q5T1N1 836 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 LRRC34Q8IZ02 419 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 FANCBQ8NB91 859 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 UBLCP1Q8WVY7 318 aaPredicted RBP11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 SEC14L1Q92503 715 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 POM121Q96HA1 1249 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 ZNF594Q96JF6 807 aaPredicted RBP11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 PBKQ96KB5 322 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 NOC4LQ9BVI4 516 aaKnown RBP11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 PUS3Q9BZE2 481 aaKnown RBP11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 INCENPQ9NQS7 918 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 SAMD15Q9P1V8 674 aa11.4□□□□□ -0.59
SUPT16H-207ENST00000557394 GLI3P10071 1580 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.593e-8■■■■□ 24.8
SUPT16H-207ENST00000557394 EPHB6O15197 1021 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 EVI5O60447 810 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 UBOX5O94941 541 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 MMEP08473 750 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 MYCLP1P12525 358 aaPredicted RBP11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 SLC1A4P43007 532 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 MMP13P45452 471 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 MRPS35P82673 323 aaKnown RBP11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 LMNB2Q03252 620 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 BNIP1Q12981 228 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 LAMB3Q13751 1172 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 TAF11Q15544 211 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 NAB2Q15742 525 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 NPY5RQ15761 445 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 ANO7Q6IWH7 933 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 OTUD6AQ7L8S5 288 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 BAP1Q92560 729 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 PRCCQ92733 491 aaPredicted RBP11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 TXLNGYQ9BZA5 131 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 KRT23Q9C075 422 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 NACA2Q9H009 215 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 ADAM7Q9H2U9 754 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 ECT2Q9H8V3 914 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 QTRT2Q9H974 415 aaKnown RBP11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 GJA3Q9Y6H8 435 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 TJP1Q07157 1748 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 TOGARAM1Q9Y4F4 1720 aa11.39□□□□□ -0.59
SUPT16H-207ENST00000557394 SMIM24O75264 130 aa11.38□□□□□ -0.59
SUPT16H-207ENST00000557394 FLOT1O75955 427 aa11.38□□□□□ -0.59
SUPT16H-207ENST00000557394 RNF8O76064 485 aa11.38□□□□□ -0.59
SUPT16H-207ENST00000557394 CHN1P15882 459 aa11.38□□□□□ -0.59
SUPT16H-207ENST00000557394 GNAZP19086 355 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms