RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 RNF180Q86T96 592 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 SPATA5Q8NB90 893 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 SH3RF3Q8TEJ3 882 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-247ENST00000557311 KCNB2Q92953 911 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 TOX2Q96NM4 488 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 PLCD4Q9BRC7 762 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 YIPF2Q9BWQ6 316 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 HMG20BQ9P0W2 317 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 BTBD7Q9P203 1132 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 LRP2BPQ9P2M1 347 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 NRBP1Q9UHY1 535 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 TTC28Q96AY4 2481 aa5.9□□□□□ -1.47
ATXN3-247ENST00000557311 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 DDX60LQ5H9U9 1706 aaKnown RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 A0A1B0GUL7 405 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 PQBP1O60828 265 aaKnown RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 COBLO75128 1261 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 DLGAP3O95886 979 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 TIMP1P01033 207 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 GH2P01242 217 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 UBTFL1P0CB47 393 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 RARBP10826 455 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 FSTP19883 344 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 RAB6AP20340 208 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 ADORA2AP29274 412 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 PPIGQ13427 754 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 COG2Q14746 738 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 CCDC85BQ15834 202 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 CCDC184Q52MB2 194 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 RPS26P11Q5JNZ5 115 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 GORABQ5T7V8 394 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 CCDC129Q6ZRS4 1044 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 Q6ZS46 218 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 BEND4Q6ZU67 534 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 ANKRD33Q7Z3H0 272 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 MAPKAPK5Q8IW41 473 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 ABRAQ8N0Z2 381 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 SLC44A5Q8NCS7 719 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 GLIS3Q8NEA6 775 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 SHCBP1Q8NEM2 672 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 TGFBRAP1Q8WUH2 860 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 MYRFLQ96LU7 910 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 NEUROD6Q96NK8 337 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 FEZ1Q99689 392 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 MOV10L1Q9BXT6 1211 aaKnown RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 PRDM12Q9H4Q4 367 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 MROH8Q9H579 483 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 DNAJC18Q9H819 358 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 AATFQ9NY61 560 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 PA2G4Q9UQ80 394 aaKnown RBP5.89□□□□□ -1.47
ATXN3-247ENST00000557311 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
ATXN3-247ENST00000557311 MGAMO43451 1857 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 MEGF11A6BM72 1044 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 TM4SF5O14894 197 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 FBXO24O75426 580 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 ECEL1O95672 775 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 UQCRFS1P1P0C7P4 283 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 VCAM1P19320 739 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 ERCC3P19447 782 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 SOX4Q06945 474 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 FAAP100Q0VG06 881 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 TFCP2Q12800 502 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 NFKBIBQ15653 356 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 RAB30Q15771 203 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 ZYXQ15942 572 aaKnown RBP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 SHROOM1Q2M3G4 852 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 SGO2Q562F6 1265 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 TMEM240Q5SV17 173 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 RASIP1Q5U651 963 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 NAA16Q6N069 864 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 TRIM42Q8IWZ5 723 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 FAM20CQ8IXL6 584 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 ARMC10Q8N2F6 343 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 SMG8Q8ND04 991 aaKnown RBP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 FAM46AQ96IP4 442 aaKnown RBP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 TMPRSS13Q9BYE2 586 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 SPATC1LQ9H0A9 340 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-247ENST00000557311 C7orf69Q9H7B7 122 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 XPNPEP3Q9NQH7 507 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 FLT1P17948 1338 aa5.88□□□□□ -1.47
ATXN3-247ENST00000557311 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 A0A1W2PQ45 241 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 A0A1W2PQY0 241 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 HMX2A2RU54 273 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms