RNA–Protein interactions for RNA: ENST00000557290.1

PSMA3-212, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-212ENST00000557290 TMEM209Q96SK2 561 aa6.32□□□□□ -1.4
PSMA3-212ENST00000557290 TOMM22Q9NS69 142 aa6.32□□□□□ -1.4
PSMA3-212ENST00000557290 SPATA6Q9NWH7 488 aaPredicted RBP6.32□□□□□ -1.4
PSMA3-212ENST00000557290 UCKL1Q9NWZ5 548 aa6.32□□□□□ -1.4
PSMA3-212ENST00000557290 PRAMEF22A3QJZ6 481 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 TGM5O43548 720 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 POU3F3P20264 500 aaPredicted RBP6.31□□□□□ -1.4
PSMA3-212ENST00000557290 PTGS1P23219 599 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 SDHAP31040 664 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 HERVK_113P62684 666 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 NFKB2Q00653 900 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 DLX2Q07687 328 aaPredicted RBP6.31□□□□□ -1.4
PSMA3-212ENST00000557290 DHCR24Q15392 516 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 VWA3BQ502W6 1294 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 PRAMEF18Q5VWM3 479 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 TTLL6Q8N841 843 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 IGDCC4Q8TDY8 1250 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 CLIC6Q96NY7 704 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 PCDH18Q9HCL0 1135 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 ACSS2Q9NR19 701 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 DLL4Q9NR61 685 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 ARHGAP20Q9P2F6 1191 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 ZFP69BQ9UJL9 534 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 SPO11Q9Y5K1 396 aa6.31□□□□□ -1.4
PSMA3-212ENST00000557290 FFAR3O14843 346 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 MPIG6BO95866 241 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 BPIP17213 487 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 CFPP27918 469 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 LSSP48449 732 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 ESRP1Q6NXG1 681 aaKnown RBP6.3□□□□□ -1.4
PSMA3-212ENST00000557290 LRSAM1Q6UWE0 723 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 SAPCD2Q86UD0 394 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 LRRC56Q8IYG6 542 aaPredicted RBP6.3□□□□□ -1.4
PSMA3-212ENST00000557290 EFHBQ8N7U6 833 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 STPG3Q8N7X2 389 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
PSMA3-212ENST00000557290 MS4A5Q9H3V2 200 aa6.3□□□□□ -1.4
PSMA3-212ENST00000557290 DBX1A6NMT0 343 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 IL18BPO95998 194 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 CANXP27824 592 aaKnown RBP6.29□□□□□ -1.4
PSMA3-212ENST00000557290 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
PSMA3-212ENST00000557290 FOXRED1Q96CU9 486 aaPredicted RBP6.29□□□□□ -1.4
PSMA3-212ENST00000557290 TTC1Q99614 292 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 AMNQ9BXJ7 453 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 IFT22Q9H7X7 185 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 EMC7Q9NPA0 242 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 INCENPQ9NQS7 918 aa6.29□□□□□ -1.4
PSMA3-212ENST00000557290 LCHNA4D1U4 455 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 GOLGA6L22H0YM25 854 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 FBXO21O94952 628 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 EYA4O95677 639 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 CYP17A1P05093 508 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 FNTBP49356 437 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 AMPD3Q01432 767 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 ATP13A4Q4VNC1 1196 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 RTN4RL1Q86UN2 441 aaPredicted RBP6.28□□□□□ -1.4
PSMA3-212ENST00000557290 C11orf74Q86VG3 221 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 TP53I13Q8NBR0 393 aaPredicted RBP6.28□□□□□ -1.4
PSMA3-212ENST00000557290 RTF1Q92541 710 aaKnown RBP6.28□□□□□ -1.4
PSMA3-212ENST00000557290 GPATCH3Q96I76 525 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 C16orf92Q96LL3 132 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 TOX2Q96NM4 488 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 TMX1Q9H3N1 280 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 COL4A3BPQ9Y5P4 624 aa6.28□□□□□ -1.4
PSMA3-212ENST00000557290 DDX3XO00571 662 aaKnown RBP eCLIP6.27□□□□□ -1.41
PSMA3-212ENST00000557290 SMAD3P84022 425 aaKnown RBP6.27□□□□□ -1.41
PSMA3-212ENST00000557290 OCRLQ01968 901 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 STAT4Q14765 748 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 SMAD2Q15796 467 aaKnown RBP6.27□□□□□ -1.41
PSMA3-212ENST00000557290 PRR31Q5SQ13 230 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 TCERG1LQ5VWI1 586 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 TRMT10BQ6PF06 316 aaKnown RBP6.27□□□□□ -1.41
PSMA3-212ENST00000557290 TTLL7Q6ZT98 887 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 DDX42Q86XP3 938 aaKnown RBP eCLIP6.27□□□□□ -1.41
PSMA3-212ENST00000557290 PASD1Q8IV76 773 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 ATL2Q8NHH9 583 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 ZCCHC14Q8WYQ9 949 aaKnown RBP6.27□□□□□ -1.41
PSMA3-212ENST00000557290 KCND1Q9NSA2 647 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 GALNT8Q9NY28 637 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 ASB1Q9Y576 335 aa6.27□□□□□ -1.41
PSMA3-212ENST00000557290 ZEB2O60315 1214 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 RPL13P26373 211 aaKnown RBP6.26□□□□□ -1.41
PSMA3-212ENST00000557290 IL13P35225 146 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 SARSP49591 514 aaKnown RBP6.26□□□□□ -1.41
PSMA3-212ENST00000557290 IL13RA1P78552 427 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 TMPRSS15P98073 1019 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 SLC6A3Q01959 620 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 EPHA7Q15375 998 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 DDB1Q16531 1140 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 HDGFL2Q7Z4V5 671 aaPredicted RBP6.26□□□□□ -1.41
PSMA3-212ENST00000557290 TMEM151BQ8IW70 566 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 WRNIP1Q96S55 665 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 PCDH12Q9NPG4 1184 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 NTMQ9P121 344 aa6.26□□□□□ -1.41
PSMA3-212ENST00000557290 UBA6A0AVT1 1052 aaPredicted RBP6.25□□□□□ -1.41
PSMA3-212ENST00000557290 SH3D21A4FU49 640 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms