RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 PRPHP41219 470 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 FXR2P51116 673 aaKnown RBP eCLIP23.5■■□□□ 1.352e-7■■■□□ 16
SEC23A-213ENST00000557280 CTTNQ14247 550 aaKnown RBP23.5■■□□□ 1.35
SEC23A-213ENST00000557280 PTPAQ15257 358 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 MARCH8Q5T0T0 291 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 ATP6V0A1Q93050 837 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 CHAMP1Q96JM3 812 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 LXNQ9BS40 222 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 PPP1R12CQ9BZL4 782 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 PP2D1A8MPX8 630 aa23.49■■□□□ 1.35
SEC23A-213ENST00000557280 KIAA0355O15063 1070 aa23.49■■□□□ 1.35
SEC23A-213ENST00000557280 RUFY4Q6ZNE9 571 aa23.49■■□□□ 1.35
SEC23A-213ENST00000557280 NOC4LQ9BVI4 516 aaKnown RBP23.49■■□□□ 1.35
SEC23A-213ENST00000557280 NOD1Q9Y239 953 aa23.49■■□□□ 1.35
SEC23A-213ENST00000557280 NR2E3Q9Y5X4 410 aa23.49■■□□□ 1.35
SEC23A-213ENST00000557280 NRCAMQ92823 1304 aa23.49■■□□□ 1.35
SEC23A-213ENST00000557280 TRIP12Q14669 1992 aaPredicted RBP23.49■■□□□ 1.35
SEC23A-213ENST00000557280 SLITRK3O94933 977 aa23.48■■□□□ 1.35
SEC23A-213ENST00000557280 PDIA4P13667 645 aaKnown RBP23.48■■□□□ 1.35
SEC23A-213ENST00000557280 QARSP47897 775 aaKnown RBP23.48■■□□□ 1.35
SEC23A-213ENST00000557280 PSMC5P62195 406 aa23.48■■□□□ 1.35
SEC23A-213ENST00000557280 GRIN1Q05586 938 aa23.48■■□□□ 1.35
SEC23A-213ENST00000557280 TMEM266Q2M3C6 531 aa23.48■■□□□ 1.35
SEC23A-213ENST00000557280 IGSF22Q8N9C0 903 aa23.48■■□□□ 1.35
SEC23A-213ENST00000557280 BBXQ8WY36 941 aaPredicted RBP23.48■■□□□ 1.35
SEC23A-213ENST00000557280 HSD17B14Q9BPX1 270 aa23.48■■□□□ 1.35
SEC23A-213ENST00000557280 SH2D3AQ9BRG2 576 aa23.48■■□□□ 1.35
SEC23A-213ENST00000557280 DAXXQ9UER7 740 aaPredicted RBP23.48■■□□□ 1.35
SEC23A-213ENST00000557280 MYH9P35579 1960 aaKnown RBP23.48■■□□□ 1.35
SEC23A-213ENST00000557280 VWA3AA6NCI4 1184 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 ZBTB39O15060 712 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 HBP1O60381 514 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 MED24O75448 989 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 P4HBP07237 508 aaKnown RBP23.47■■□□□ 1.35
SEC23A-213ENST00000557280 SPATA31C1P0DKV0 1188 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 TRIM71Q2Q1W2 868 aaKnown RBP23.47■■□□□ 1.35
SEC23A-213ENST00000557280 PLA2G4FQ68DD2 849 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 DTHD1Q6ZMT9 781 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 SERINC5Q86VE9 423 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 HIPK3Q9H422 1215 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 TFIP11Q9UBB9 837 aaKnown RBP23.47■■□□□ 1.35
SEC23A-213ENST00000557280 SEPT9Q9UHD8 586 aaPredicted RBP23.47■■□□□ 1.35
SEC23A-213ENST00000557280 TUBE1Q9UJT0 475 aa23.47■■□□□ 1.35
SEC23A-213ENST00000557280 MBLAC1A4D2B0 266 aaPredicted RBP23.46■■□□□ 1.35
SEC23A-213ENST00000557280 MARCKSP29966 332 aaPredicted RBP23.46■■□□□ 1.35
SEC23A-213ENST00000557280 CDC25AP30304 524 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 CYP2C18P33260 490 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 PDE4DIPQ5VU43 2346 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 ANO5Q75V66 913 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 TPH2Q8IWU9 490 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 FAM167AQ96KS9 214 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 WNT8AQ9H1J5 351 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 LRWD1Q9UFC0 647 aa23.46■■□□□ 1.35
SEC23A-213ENST00000557280 RBM19Q9Y4C8 960 aaKnown RBP23.46■■□□□ 1.35
SEC23A-213ENST00000557280 A0A087WWV3 80 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 BMP15O95972 392 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 NASPP49321 788 aaPredicted RBP23.45■■□□□ 1.34
SEC23A-213ENST00000557280 PTK7Q13308 1070 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 ECM1Q16610 540 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 XKR3Q5GH77 459 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 ARL6IP4Q66PJ3 421 aaKnown RBP23.45■■□□□ 1.34
SEC23A-213ENST00000557280 CATSPER3Q86XQ3 398 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 ZNF579Q8NAF0 562 aaKnown RBP23.45■■□□□ 1.34
SEC23A-213ENST00000557280 PRKAG2Q9UGJ0 569 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 CEP131Q9UPN4 1083 aa23.45■■□□□ 1.34
SEC23A-213ENST00000557280 COL1A2P08123 1366 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 RRN3P2A6NIE6 340 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 DDX11L8A8MPP1 907 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 C22orf31O95567 290 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 GNAT1P11488 350 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 RAG1P15918 1043 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 DNM1Q05193 864 aaKnown RBP23.44■■□□□ 1.34
SEC23A-213ENST00000557280 TARBP2Q15633 366 aaKnown RBP23.44■■□□□ 1.34
SEC23A-213ENST00000557280 MTERF2Q49AM1 385 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 ZNF484Q5JVG2 852 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 POTEGQ6S5H5 508 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 MTHFD1LQ6UB35 978 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 C4orf19Q8IY42 314 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 NEK9Q8TD19 979 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 BADQ92934 168 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 CEP89Q96ST8 783 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 MMTAG2Q9BU76 263 aaKnown RBP23.44■■□□□ 1.34
SEC23A-213ENST00000557280 ZSWIM4Q9H7M6 989 aa23.44■■□□□ 1.34
SEC23A-213ENST00000557280 FBXO2Q9UK22 296 aaPredicted RBP23.44■■□□□ 1.34
SEC23A-213ENST00000557280 TIMP1P01033 207 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 KLRC1P26715 233 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 MAGEA10P43363 369 aaPredicted RBP23.43■■□□□ 1.34
SEC23A-213ENST00000557280 CCL23P55773 120 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 NPEPPSP55786 919 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 MDM2Q00987 491 aaPredicted RBP23.43■■□□□ 1.34
SEC23A-213ENST00000557280 PDIA5Q14554 519 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 TRAF7Q6Q0C0 670 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 ZNF396Q96N95 335 aaPredicted RBP23.43■■□□□ 1.34
SEC23A-213ENST00000557280 POLR3CQ9BUI4 534 aaPredicted RBP23.43■■□□□ 1.34
SEC23A-213ENST00000557280 NIFKQ9BYG3 293 aaKnown RBP23.43■■□□□ 1.34
SEC23A-213ENST00000557280 NRBP2Q9NSY0 501 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 TANC1Q9C0D5 1861 aa23.43■■□□□ 1.34
SEC23A-213ENST00000557280 LYPLA2O95372 231 aa23.42■■□□□ 1.34
SEC23A-213ENST00000557280 YWHABP31946 246 aaKnown RBP23.42■■□□□ 1.34
SEC23A-213ENST00000557280 CCT6AP40227 531 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms