RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ZBTB24O43167 697 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 PLA2G6O60733 806 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 STAG3L1P0CL83 205 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 GNAT1P11488 350 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 CD46P15529 392 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 RBM10P98175 930 aaKnown RBP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 OS9Q13438 667 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 LAMC2Q13753 1193 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 KCNC3Q14003 757 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 SPECC1Q5M775 1068 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 SLFN13Q68D06 897 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 PHLDB3Q6NSJ2 640 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 CCDC62Q6P9F0 684 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 CHST3Q7LGC8 479 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 OTOP3Q7RTS5 596 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 PURBQ96QR8 312 aaKnown RBP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 GPR20Q99678 358 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 RC3H2Q9HBD1 1191 aaKnown RBP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 ZNF287Q9HBT7 754 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 NGRNQ9NPE2 291 aaKnown RBP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 FBXO4Q9UKT5 387 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 PNMA2Q9UL42 364 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 RAB23Q9ULC3 237 aa6.8□□□□□ -1.32
ATXN3-245ENST00000556958 SALL2Q9Y467 1007 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-245ENST00000556958 SIPA1L1O43166 1804 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-245ENST00000556958 LAMTOR5O43504 91 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 TTLL1O95922 423 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 EOMESO95936 686 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 F2P00734 622 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 ICAM1P05362 532 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 CTSHP09668 335 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 EDNRBP24530 442 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 CALML3P27482 149 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 SLC1A4P43007 532 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 LY6KQ17RY6 165 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 SPOUT1Q5T280 376 aaKnown RBP6.79□□□□□ -1.32
ATXN3-245ENST00000556958 XP32Q5T750 250 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 N4BP2L1Q5TBK1 243 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-245ENST00000556958 IL31Q6EBC2 164 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 LLGL2Q6P1M3 1020 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 XRRA1Q6P2D8 792 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 UNQ6494/PRO21346Q6UXR6 183 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 ZNF444Q8N0Y2 327 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-245ENST00000556958 PCMTD1Q96MG8 357 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-245ENST00000556958 TMEM260Q9NX78 707 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 IGSF9Q9P2J2 1179 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 SMG5Q9UPR3 1016 aaKnown RBP6.79□□□□□ -1.32
ATXN3-245ENST00000556958 LZTS1Q9Y250 596 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 CEP295Q9C0D2 2601 aa6.79□□□□□ -1.32
ATXN3-245ENST00000556958 ASH1LQ9NR48 2969 aaKnown RBP6.78□□□□□ -1.32
ATXN3-245ENST00000556958 LRP3O75074 770 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 FGF18O76093 207 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 DCNP07585 359 aaKnown RBP6.78□□□□□ -1.32
ATXN3-245ENST00000556958 PDE6AP16499 860 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 TGM1P22735 817 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 RING1Q06587 406 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 ARHGAP1Q07960 439 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 BMS1Q14692 1282 aaKnown RBP6.78□□□□□ -1.32
ATXN3-245ENST00000556958 FAM26DQ5JW98 314 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 RNF207Q6ZRF8 634 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 TRIM46Q7Z4K8 759 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 NPAS4Q8IUM7 802 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 THNSL1Q8IYQ7 743 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 LCORLQ8N3X6 602 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 TMEM151AQ8N4L1 468 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 TET1Q8NFU7 2136 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 PPTC7Q8NI37 304 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 GMCL1Q96IK5 515 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 EPC1Q9H2F5 836 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 ANTXR1Q9H6X2 564 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 TBC1D17Q9HA65 648 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 KCNK12Q9HB15 430 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 ZSCAN32Q9NX65 697 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 MTMR4Q9NYA4 1195 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 CDK5RAP2Q96SN8 1893 aa6.78□□□□□ -1.32
ATXN3-245ENST00000556958 ZNF532Q9HCE3 1301 aa6.77□□□□□ -1.32
ATXN3-245ENST00000556958 FRYLO94915 3013 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 CYP2D7A0A087X1C5 515 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 EIF4E1BA6NMX2 242 aaKnown RBP6.77□□□□□ -1.33
ATXN3-245ENST00000556958 TAF4O00268 1085 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 FSCN2O14926 492 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 PRKAB2O43741 272 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 ARIH2O95376 493 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 ZIC2O95409 532 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-245ENST00000556958 ARP10275 920 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 RASA1P20936 1047 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 RARSP54136 660 aaKnown RBP6.77□□□□□ -1.33
ATXN3-245ENST00000556958 ERVFC1P60507 584 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 KRT17Q04695 432 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 CSTF1Q05048 431 aaKnown RBP6.77□□□□□ -1.33
ATXN3-245ENST00000556958 STXBP2Q15833 593 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 RCSD1Q6JBY9 416 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 KIAA1841Q6NSI8 718 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 CTR9Q6PD62 1173 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 FAM43BQ6ZT52 329 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-245ENST00000556958 SEPT14Q6ZU15 432 aa6.77□□□□□ -1.33
ATXN3-245ENST00000556958 RSPH3Q86UC2 560 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms