RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 NCOA1Q15788 1441 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 KIAA1107Q9UPP5 1409 aa7.32□□□□□ -1.24
HIF1A-209ENST00000556827 IQSEC2Q5JU85 1478 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 MROH6A6NGR9 719 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 GABREP78334 506 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 TKFCQ3LXA3 575 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 PRR31Q5SQ13 230 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 RSPO2Q6UXX9 243 aaPredicted RBP7.31□□□□□ -1.24
HIF1A-209ENST00000556827 LGI4Q8N135 537 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 TXNDC5Q8NBS9 432 aaKnown RBP7.31□□□□□ -1.24
HIF1A-209ENST00000556827 PIP4K2CQ8TBX8 421 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 L2HGDHQ9H9P8 463 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
HIF1A-209ENST00000556827 A2MP01023 1474 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 CYP7B1O75881 506 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 CYP1A1P04798 512 aaPredicted RBP7.3□□□□□ -1.24
HIF1A-209ENST00000556827 NFKB2Q00653 900 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 TMC5Q6UXY8 1006 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 MAMDC2Q7Z304 686 aaPredicted RBP7.3□□□□□ -1.24
HIF1A-209ENST00000556827 APPBP2Q92624 585 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 LCORQ96JN0 433 aaPredicted RBP7.3□□□□□ -1.24
HIF1A-209ENST00000556827 WRNIP1Q96S55 665 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 TMEM209Q96SK2 561 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 KCNJ15Q99712 375 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 ASH2LQ9UBL3 628 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 GPATCH8Q9UKJ3 1502 aaKnown RBP7.3□□□□□ -1.24
HIF1A-209ENST00000556827 PREX2Q70Z35 1606 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 ABCA6Q8N139 1617 aa7.3□□□□□ -1.24
HIF1A-209ENST00000556827 ZNF335Q9H4Z2 1342 aaPredicted RBP7.29□□□□□ -1.24
HIF1A-209ENST00000556827 WASHC2CQ9Y4E1 1318 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 CCDC163A0A0D9SF12 145 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.29□□□□□ -1.24
HIF1A-209ENST00000556827 KIF3BO15066 747 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 TOM1O60784 492 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 CRTAMO95727 393 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 LRG1P02750 347 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 TSPY4P0CV99 314 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 TSPY10P0CW01 314 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 ZNF28P17035 718 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 GRK2P25098 689 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 GRK3P35626 688 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 GUCY1A3Q02108 690 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 KIZQ2M2Z5 673 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 CYP4F22Q6NT55 531 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 HHIPL2Q6UWX4 724 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 FGD2Q7Z6J4 655 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 MTDHQ86UE4 582 aaKnown RBP7.29□□□□□ -1.24
HIF1A-209ENST00000556827 HOMER1Q86YM7 354 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 TRIM48Q8IWZ4 208 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 SCLYQ96I15 445 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 ZFYVE21Q9BQ24 234 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 SLC6A20Q9NP91 592 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 SFMBT1Q9UHJ3 866 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 INVSQ9Y283 1065 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 CD2APQ9Y5K6 639 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 CAMSAP1Q5T5Y3 1602 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 SAMD9LQ8IVG5 1584 aa7.29□□□□□ -1.24
HIF1A-209ENST00000556827 ZNF536O15090 1300 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 SYCP2Q9BX26 1530 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 SLC27A2O14975 620 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 CDC45O75419 566 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 RASGRP1O95267 797 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 ITGB3P05106 788 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 GNAT1P11488 350 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 IL13P35225 146 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 BRAPQ7Z569 592 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 THEMISQ8N1K5 641 aaPredicted RBP7.28□□□□□ -1.24
HIF1A-209ENST00000556827 GSTCDQ8NEC7 633 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.28□□□□□ -1.24
HIF1A-209ENST00000556827 MRPL4Q9BYD3 311 aaKnown RBP7.28□□□□□ -1.24
HIF1A-209ENST00000556827 IPPKQ9H8X2 491 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 TMA7Q9Y2S6 64 aaKnown RBP7.28□□□□□ -1.24
HIF1A-209ENST00000556827 C3P01024 1663 aa7.28□□□□□ -1.24
HIF1A-209ENST00000556827 ATP7AQ04656 1500 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 CDC42BPBQ9Y5S2 1711 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 C9orf118A6NHY6 69 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 AQP7O14520 342 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 PLD2O14939 933 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 PLATP00750 562 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 SOD2P04179 222 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 GRIN1Q05586 938 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 SPIRE1Q08AE8 756 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 TRIM61Q5EBN2 209 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 SDE2Q6IQ49 451 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 TMEM168Q9H0V1 697 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 TRIM39Q9HCM9 518 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 SMPD4Q9NXE4 827 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 NUB1Q9Y5A7 615 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 DHX29Q7Z478 1369 aaKnown RBP7.27□□□□□ -1.25
HIF1A-209ENST00000556827 PLA2R1Q13018 1463 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 STRCQ7RTU9 1775 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 SETD1BQ9UPS6 1966 aaKnown RBP7.27□□□□□ -1.25
HIF1A-209ENST00000556827 RTEL1-TNFRSF6BF6WH68 1400 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 PTPRKQ15262 1439 aa7.27□□□□□ -1.25
HIF1A-209ENST00000556827 ZNF644Q9H582 1327 aaPredicted RBP7.27□□□□□ -1.25
HIF1A-209ENST00000556827 ITSN2Q9NZM3 1697 aa7.26□□□□□ -1.25
HIF1A-209ENST00000556827 TNRQ92752 1358 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms