RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 ETNPPLQ8TBG4 499 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 DNAJB3Q8WWF6 145 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 EVPLQ92817 2033 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
SNX6-208ENST00000556712 GUCD1Q96NT3 240 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 BRMS1Q9HCU9 246 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 SH2B1Q9NRF2 756 aaPredicted RBP11.73□□□□□ -0.53
SNX6-208ENST00000556712 GABBR1Q9UBS5 961 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
SNX6-208ENST00000556712 SAMM50Q9Y512 469 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 SLC4A7Q9Y6M7 1214 aa11.73□□□□□ -0.53
SNX6-208ENST00000556712 MBLAC1A4D2B0 266 aaPredicted RBP11.72□□□□□ -0.53
SNX6-208ENST00000556712 ST18O60284 1047 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 PSAPP07602 524 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 MYOGP15173 224 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 ATP2A2P16615 1042 aaKnown RBP11.72□□□□□ -0.53
SNX6-208ENST00000556712 DEFB103AP81534 67 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 TMEM62Q0P6H9 643 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 TRIM29Q14134 588 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 CKAP2LQ8IYA6 745 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 SMAP1Q8IYB5 467 aaPredicted RBP11.72□□□□□ -0.53
SNX6-208ENST00000556712 TIFAQ96CG3 184 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 C8orf76Q96K31 380 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 RIT2Q99578 217 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 LLPHQ9BRT6 129 aaKnown RBP11.72□□□□□ -0.53
SNX6-208ENST00000556712 NKX2-4Q9H2Z4 354 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 DISC1Q9NRI5 854 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 PCDHA10Q9Y5I2 948 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 ARID2Q68CP9 1835 aa11.72□□□□□ -0.53
SNX6-208ENST00000556712 COL4A4P53420 1690 aaPredicted RBP11.71□□□□□ -0.53
SNX6-208ENST00000556712 RRN3P2A6NIE6 340 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 ZNF862O60290 1169 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 HBP1O60381 514 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 CAND2O75155 1236 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 CHRNA1P02708 482 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 GHRP10912 638 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 SLC26A2P50443 739 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 JAK3P52333 1124 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.53
SNX6-208ENST00000556712 PRKCEQ02156 737 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 MGAT3Q09327 533 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 TAF2Q6P1X5 1199 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 B3GNT9Q6UX72 402 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 DBF4BQ8NFT6 615 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 KCNMB3Q9NPA1 279 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 MAFBQ9Y5Q3 323 aaPredicted RBP11.71□□□□□ -0.53
SNX6-208ENST00000556712 CDY2AQ9Y6F7 541 aa11.71□□□□□ -0.53
SNX6-208ENST00000556712 COL1A2P08123 1366 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 TMEM150BA6NC51 233 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 EML1O00423 815 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 BAIAP3O94812 1187 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 PARNO95453 639 aaKnown RBP11.7□□□□□ -0.54
SNX6-208ENST00000556712 GCFC2P16383 781 aaKnown RBP11.7□□□□□ -0.54
SNX6-208ENST00000556712 KCNJ6P48051 423 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 HMGN5P82970 282 aaKnown RBP11.7□□□□□ -0.54
SNX6-208ENST00000556712 PPP4R3AQ6IN85 833 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 MTHFD1LQ6UB35 978 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 HAS1Q92839 578 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 TMX3Q96JJ7 454 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 PPP1R16BQ96T49 567 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 SLC9A7Q96T83 725 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 SEMA6BQ9H3T3 888 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 VAV3Q9UKW4 847 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 CDH23Q9H251 3354 aa11.7□□□□□ -0.54
SNX6-208ENST00000556712 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 ARHGEF15O94989 841 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 C22orf31O95567 290 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 OATP04181 439 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 ATP2B1P20020 1258 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 KLRC1P26715 233 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 SFNP31947 248 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 MRPS6P82932 125 aaKnown RBP11.69□□□□□ -0.54
SNX6-208ENST00000556712 LPIN1Q14693 890 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 PLEKHG4Q58EX7 1191 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 FAM26DQ5JW98 314 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 FAM117BQ6P1L5 589 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNX6-208ENST00000556712 RPAINQ86UA6 219 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 RSPH3Q86UC2 560 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 HERC6Q8IVU3 1022 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 FAM184AQ8NB25 1140 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 BBXQ8WY36 941 aaPredicted RBP11.69□□□□□ -0.54
SNX6-208ENST00000556712 MYLIPQ8WY64 445 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 CDX2Q99626 313 aaPredicted RBP11.69□□□□□ -0.54
SNX6-208ENST00000556712 SH2D3AQ9BRG2 576 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 BACH2Q9BYV9 841 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 IFIH1Q9BYX4 1025 aaKnown RBP11.69□□□□□ -0.54
SNX6-208ENST00000556712 ZNF576Q9H609 170 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 MSRAQ9UJ68 235 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 PCDHA2Q9Y5H9 948 aa11.69□□□□□ -0.54
SNX6-208ENST00000556712 TMEM265A0A087WTH1 108 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 SMIM35A0A1B0GVV1 85 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 ABHD14A-ACY1A0A1B0GW23 586 aa11.68□□□□□ -0.54
SNX6-208ENST00000556712 CA3P07451 260 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms