RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 TUBB2AQ13885 445 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 KIF4BQ2VIQ3 1234 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 SV2BQ7L1I2 683 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 ATG9AQ7Z3C6 839 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 CCDC186Q7Z3E2 898 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 VSIG10LQ86VR7 867 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 LRRC8AQ8IWT6 810 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 TRIML1Q8N9V2 468 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 FSIP1Q8NA03 581 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 EYA3Q99504 573 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 MPHOSPH8Q99549 860 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 WDR18Q9BV38 432 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 TUBB2BQ9BVA1 445 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 EMILIN2Q9BXX0 1053 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 RTFDC1Q9BY42 306 aaPredicted RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 CCDC86Q9H6F5 360 aaKnown RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 TTC12Q9H892 705 aaPredicted RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 RNF19AQ9NV58 838 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 GNL3LQ9NVN8 582 aaKnown RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 BSDC1Q9NW68 430 aaPredicted RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 ARGLU1Q9NWB6 273 aaPredicted RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 ORC3Q9UBD5 711 aaPredicted RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 PARP2Q9UGN5 583 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 ZNRF3Q9ULT6 936 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 PCDHGC5Q9Y5F6 944 aa6.96□□□□□ -1.3
CPSF2-205ENST00000556622 MORC2Q9Y6X9 1032 aaPredicted RBP6.96□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF609O15014 1411 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CCDC69A6NI79 296 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CTIFO43310 598 aaKnown RBP6.95□□□□□ -1.3
CPSF2-205ENST00000556622 PRC1O43663 620 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF862O60290 1169 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CUTAO60888 179 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 PAPLNO95428 1278 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CALM1P0DP23 149 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CALM2P0DP24 149 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CALM3P0DP25 149 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 SKILP12757 684 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 TNNT1P13805 278 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 SLC5A1P13866 664 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 DRD2P14416 443 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 SFPQP23246 707 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF157P51786 506 aaPredicted RBP6.95□□□□□ -1.3
CPSF2-205ENST00000556622 AKAP17AQ02040 695 aaKnown RBP6.95□□□□□ -1.3
CPSF2-205ENST00000556622 TNIP1Q15025 636 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 ATP2B3Q16720 1220 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 RILPL1Q5EBL4 403 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 METTL24Q5JXM2 366 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 LDHAL6AQ6ZMR3 332 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 LUZP1Q86V48 1076 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CKAP2LQ8IYA6 745 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 FAM177A1Q8N128 213 aaPredicted RBP6.95□□□□□ -1.3
CPSF2-205ENST00000556622 LINC00301Q8NCQ3 95 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 TBC1D16Q8TBP0 767 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 LPIN2Q92539 896 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 DDX11Q96FC9 970 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 FBXL18Q96ME1 805 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 BRMS1Q9HCU9 246 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 CNNM1Q9NRU3 951 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 POLLQ9UGP5 575 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
CPSF2-205ENST00000556622 MINPP1Q9UNW1 487 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 TNRC6CQ9HCJ0 1690 aaKnown RBP6.95□□□□□ -1.3
CPSF2-205ENST00000556622 STK36Q9NRP7 1315 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 SALL1Q9NSC2 1324 aa6.95□□□□□ -1.3
CPSF2-205ENST00000556622 TCHHQ07283 1943 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 DICER1Q9UPY3 1922 aaKnown RBP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 KLF18A0A0U1RQI7 1052 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 IQCA1LA6NCM1 817 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 DBX1A6NMT0 343 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 GOLGA8BA8MQT2 603 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 ZBTB43O43298 467 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 RAD17O75943 681 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 UFL1O94874 794 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SMC2O95347 1197 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 APPP05067 770 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 TUBBP07437 444 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 HOXA7P31268 230 aaPredicted RBP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 METAP2P50579 478 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 TIMM10P62072 90 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 CXCL9Q07325 125 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SSRP1Q08945 709 aaKnown RBP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 APOBRQ0VD83 1088 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SLC39A14Q15043 492 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 PUM3Q15397 648 aaKnown RBP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SGO2Q562F6 1265 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 CCDC178Q5BJE1 867 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 EPHA10Q5JZY3 1008 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 UTP14CQ5TAP6 766 aaKnown RBP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 ANO1Q5XXA6 986 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 CIAPIN1Q6FI81 312 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SGMS1Q86VZ5 419 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SULF2Q8IWU5 870 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 GPC2Q8N158 579 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 MLKLQ8NB16 471 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SPC24Q8NBT2 197 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 ANKRD20A12PQ8NF67 263 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 ENGASEQ8NFI3 743 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms