RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CHSY3Q70JA7 882 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 BTN2A1Q7KYR7 527 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 TMEM87AQ8NBN3 555 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 NUDT8Q8WV74 236 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 RABGGTAQ92696 567 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 SMARCE1Q969G3 411 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 CDCA5Q96FF9 252 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ANKRD27Q96NW4 1050 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 RBM14Q96PK6 669 aaKnown RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 PSKH2Q96QS6 385 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 NR1H4Q96RI1 486 aaPredicted RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 TSC22D3Q99576 134 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 RHOXF2Q9BQY4 288 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ADAM19Q9H013 955 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 PIF1Q9H611 641 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ZSWIM4Q9H7M6 989 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 DBNDD1Q9H9R9 158 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ZFYVE1Q9HBF4 777 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 GPR108Q9NPR9 543 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 PIH1D1Q9NWS0 290 aaKnown RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 PPP1R14DQ9NXH3 145 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 PA2G4Q9UQ80 394 aaKnown RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 CNPY2Q9Y2B0 182 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 R3HDM2Q9Y2K5 976 aaKnown RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 SH3GLB1Q9Y371 365 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ATP6V1DQ9Y5K8 247 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 SYNJ2BP-COX16A0A087WUM0 186 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 TRIM64A6NGJ6 449 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 TRIM64BA6NI03 449 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 LRRIQ3A6PVS8 624 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 B4DLN1 442 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 AKR1B15C9JRZ8 316 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 SCAMP3O14828 347 aaKnown RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 TEX28O15482 410 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 YKT6O15498 198 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 SULT1B1O43704 296 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 KLHL41O60662 606 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 ZC3H11AO75152 810 aaKnown RBP eCLIP6.79□□□□□ -1.32
TDP1-215ENST00000556498 TSC22D2O75157 780 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 LUC7L3O95232 432 aaKnown RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 BAG2O95816 211 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 ALBP02768 609 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 ZFYP08048 801 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 H2AFXP16104 143 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 GRK2P25098 689 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 TMOD1P28289 359 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 PRKAR2BP31323 418 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 PDE6BP35913 854 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 UBA7P41226 1012 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 PSMC4P43686 418 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 KPNA1P52294 538 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 BNIP1Q12981 228 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 LAPTM5Q13571 262 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 NFE2L1Q14494 772 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 SEMA3AQ14563 771 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 TAF1CQ15572 869 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 GRIK5Q16478 980 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 IMMTQ16891 758 aaKnown RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 GRAMD1BQ3KR37 738 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 BRDTQ58F21 947 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 NDUFAF5Q5TEU4 345 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 TWF2Q6IBS0 349 aaKnown RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 LLGL2Q6P1M3 1020 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 TMCO3Q6UWJ1 677 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 DTHD1Q6ZMT9 781 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 SESTD1Q86VW0 696 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 RASSF3Q86WH2 238 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 DDX42Q86XP3 938 aaKnown RBP eCLIP6.79□□□□□ -1.32
TDP1-215ENST00000556498 SLC15A3Q8IY34 581 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 ZNF713Q8N859 430 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 SMARCC2Q8TAQ2 1214 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 CCHCR1Q8TD31 782 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 ASAP3Q8TDY4 903 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 SKA1Q96BD8 255 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 CLIP3Q96DZ5 547 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 GPR101Q96P66 508 aaPredicted RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 MTMR9Q96QG7 549 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 CD93Q9NPY3 652 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 HESX1Q9UBX0 185 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 MTRF1LQ9UGC7 380 aaKnown RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 INTUQ9ULD6 942 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 MRPS23Q9Y3D9 190 aaKnown RBP6.79□□□□□ -1.32
TDP1-215ENST00000556498 FHOD1Q9Y613 1164 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 MTUS2Q5JR59 1369 aa6.79□□□□□ -1.32
TDP1-215ENST00000556498 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 A6NNZ2 444 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 BTBD11A6QL63 1104 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 PRSS47A8MTI9 375 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 RASA4BC9J798 803 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 M0R082 166 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 NVLO15381 856 aaKnown RBP6.78□□□□□ -1.32
TDP1-215ENST00000556498 PNMA6AP0CW24 399 aaPredicted RBP6.78□□□□□ -1.32
TDP1-215ENST00000556498 PTPRAP18433 802 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 CDC27P30260 824 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 HSD17B2P37059 387 aa6.78□□□□□ -1.32
TDP1-215ENST00000556498 ST13P50502 369 aaKnown RBP6.78□□□□□ -1.32
TDP1-215ENST00000556498 HSD17B7P56937 341 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms