RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CRYGNQ8WXF5 182 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 MRPL38Q96DV4 380 aaKnown RBP25.7■■□□□ 1.7
ACTN1-220ENST00000556433 AGXT2Q9BYV1 514 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 TRPV2Q9Y5S1 764 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 SIP14410 1827 aa25.7■■□□□ 1.7
ACTN1-220ENST00000556433 IGLV3-22A0A075B6J6 115 aa25.69■■□□□ 1.7
ACTN1-220ENST00000556433 H3BNC9 293 aa25.69■■□□□ 1.7
ACTN1-220ENST00000556433 DHX15O43143 795 aaKnown RBP25.69■■□□□ 1.7
ACTN1-220ENST00000556433 PPFIA3O75145 1194 aa25.69■■□□□ 1.7
ACTN1-220ENST00000556433 MTHFD1LQ6UB35 978 aa25.69■■□□□ 1.7
ACTN1-220ENST00000556433 REXO1Q8N1G1 1221 aaKnown RBP25.69■■□□□ 1.7
ACTN1-220ENST00000556433 SQORQ9Y6N5 450 aa25.69■■□□□ 1.7
ACTN1-220ENST00000556433 NID2Q14112 1375 aa25.69■■□□□ 1.7
ACTN1-220ENST00000556433 SMIM35A0A1B0GVV1 85 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 IPO5O00410 1097 aaKnown RBP25.68■■□□□ 1.7
ACTN1-220ENST00000556433 HBP1O60381 514 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 KLRC1P26715 233 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 NTRK3Q16288 839 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 SWSAP1Q6NVH7 229 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 MIS18BP1Q6P0N0 1132 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 NME8Q8N427 588 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 ZNF577Q9BSK1 485 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 SLC26A6Q9BXS9 759 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 CELF4Q9BZC1 486 aaKnown RBP25.68■■□□□ 1.7
ACTN1-220ENST00000556433 ZNF302Q9NR11 478 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 REV3LO60673 3130 aa25.68■■□□□ 1.7
ACTN1-220ENST00000556433 PDIA3P30101 505 aaKnown RBP25.67■■□□□ 1.7
ACTN1-220ENST00000556433 CCT2P78371 535 aaKnown RBP25.67■■□□□ 1.7
ACTN1-220ENST00000556433 PDXDC2PQ6P474 469 aa25.67■■□□□ 1.7
ACTN1-220ENST00000556433 CCDC60Q8IWA6 550 aaPredicted RBP25.67■■□□□ 1.7
ACTN1-220ENST00000556433 ATP8B4Q8TF62 1192 aa25.67■■□□□ 1.7
ACTN1-220ENST00000556433 UBE2ZQ9H832 354 aaPredicted RBP25.67■■□□□ 1.7
ACTN1-220ENST00000556433 TBC1D22BQ9NU19 505 aa25.67■■□□□ 1.7
ACTN1-220ENST00000556433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.66■■□□□ 1.7
ACTN1-220ENST00000556433 RTN4RL1Q86UN2 441 aaPredicted RBP25.66■■□□□ 1.7
ACTN1-220ENST00000556433 BICD2Q8TD16 824 aa25.66■■□□□ 1.7
ACTN1-220ENST00000556433 RASGRP4Q8TDF6 673 aa25.66■■□□□ 1.7
ACTN1-220ENST00000556433 FTHL17Q9BXU8 183 aa25.66■■□□□ 1.7
ACTN1-220ENST00000556433 RNF26Q9BY78 433 aaPredicted RBP25.66■■□□□ 1.7
ACTN1-220ENST00000556433 PADI3Q9ULW8 664 aa25.66■■□□□ 1.7
ACTN1-220ENST00000556433 IFNAR1P17181 557 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 CTNNB1P35222 781 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 EVCP57679 992 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 SETQ01105 290 aaPredicted RBP25.65■■□□□ 1.7
ACTN1-220ENST00000556433 KRT76Q01546 638 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 PRR16Q569H4 304 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 BANK1Q8NDB2 785 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 CCDC148Q8NFR7 591 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 LINC01599Q8WXQ3 324 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 NCOA5Q9HCD5 579 aaKnown RBP25.65■■□□□ 1.7
ACTN1-220ENST00000556433 BRWD1Q9NSI6 2320 aa25.65■■□□□ 1.7
ACTN1-220ENST00000556433 ADGRA3Q8IWK6 1321 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 IGSF9BQ9UPX0 1349 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 RB1P06400 928 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 ATP4AP20648 1035 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 BMPR1AP36894 532 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 PAK2Q13177 524 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 BTG3Q14201 252 aaPredicted RBP25.64■■□□□ 1.7
ACTN1-220ENST00000556433 TIGD5Q53EQ6 642 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 ZNF484Q5JVG2 852 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 ZNF746Q6NUN9 644 aaPredicted RBP25.64■■□□□ 1.7
ACTN1-220ENST00000556433 RUFY3Q7L099 469 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 CKAP2LQ8IYA6 745 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 ZNF689Q96CS4 500 aaPredicted RBP25.64■■□□□ 1.7
ACTN1-220ENST00000556433 VPS54Q9P1Q0 977 aa25.64■■□□□ 1.7
ACTN1-220ENST00000556433 KDM3AQ9Y4C1 1321 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 DGKIO75912 1065 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 KCNA5P22460 613 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 CIITAP33076 1130 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 RC3H2Q9HBD1 1191 aaKnown RBP25.63■■□□□ 1.69
ACTN1-220ENST00000556433 ZSWIM6Q9HCJ5 1215 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 TCEAL9Q9UHQ7 104 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 GINS2Q9Y248 185 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 RWDD3Q9Y3V2 267 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 COL4A6Q14031 1691 aa25.63■■□□□ 1.69
ACTN1-220ENST00000556433 COL1A2P08123 1366 aa25.62■■□□□ 1.69
ACTN1-220ENST00000556433 C5orf67F2Z3F1 127 aa25.62■■□□□ 1.69
ACTN1-220ENST00000556433 EPB41L2O43491 1005 aaKnown RBP25.62■■□□□ 1.69
ACTN1-220ENST00000556433 KIAA0319LQ8IZA0 1049 aa25.62■■□□□ 1.69
ACTN1-220ENST00000556433 PCDHA10Q9Y5I2 948 aa25.62■■□□□ 1.69
ACTN1-220ENST00000556433 MAFBQ9Y5Q3 323 aaPredicted RBP25.62■■□□□ 1.69
ACTN1-220ENST00000556433 TTC3P53804 2025 aa25.62■■□□□ 1.69
ACTN1-220ENST00000556433 XIRP2A4UGR9 3374 aa25.62■■□□□ 1.69
ACTN1-220ENST00000556433 MUC3AQ02505 3323 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 PSAPP07602 524 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 LINC00271P0C7V0 271 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 NLRP5P59047 1200 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 NFX1Q12986 1120 aaKnown RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 TOB2Q14106 344 aaPredicted RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 TMEM266Q2M3C6 531 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 LEXMQ3ZCV2 418 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 TCEAL5Q5H9L2 206 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 TRMT1LQ7Z2T5 733 aaKnown RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 NPAS4Q8IUM7 802 aa25.61■■□□□ 1.69
ACTN1-220ENST00000556433 SMAP1Q8IYB5 467 aaPredicted RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 BBXQ8WY36 941 aaPredicted RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 CLP1Q92989 425 aaKnown RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 C11orf84Q9BUA3 381 aaPredicted RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 NSUN3Q9H649 340 aaKnown RBP25.61■■□□□ 1.69
ACTN1-220ENST00000556433 CDHR5Q9HBB8 845 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms