RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TJAP1Q5JTD0 557 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 ZNF484Q5JVG2 852 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNX6-207ENST00000556303 TSHZ1Q6ZSZ6 1077 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 MYOCDQ8IZQ8 938 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 ZNF710Q8N1W2 664 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 DAGLBQ8NCG7 672 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
SNX6-207ENST00000556303 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 DNAJB3Q8WWF6 145 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 COL25A1Q9BXS0 654 aaPredicted RBP14.3□□□□□ -0.12
SNX6-207ENST00000556303 FTHL17Q9BXU8 183 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 UPF3BQ9BZI7 483 aaKnown RBP14.3□□□□□ -0.12
SNX6-207ENST00000556303 ZNF302Q9NR11 478 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 VPS54Q9P1Q0 977 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 PCDHA4Q9UN74 947 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 PCDHA10Q9Y5I2 948 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 MAFBQ9Y5Q3 323 aaPredicted RBP14.3□□□□□ -0.12
SNX6-207ENST00000556303 KDM3AQ9Y4C1 1321 aa14.3□□□□□ -0.12
SNX6-207ENST00000556303 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.29□□□□□ -0.12
SNX6-207ENST00000556303 PSAPP07602 524 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 MRPS6P82932 125 aaKnown RBP14.29□□□□□ -0.12
SNX6-207ENST00000556303 PRR16Q569H4 304 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 FBXO47Q5MNV8 452 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 MOXD1Q6UVY6 613 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
SNX6-207ENST00000556303 RIT2Q99578 217 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 THEGQ9P2T0 379 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 CEP131Q9UPN4 1083 aa14.29□□□□□ -0.12
SNX6-207ENST00000556303 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 CYP3A7-CYP3A51PA0A087WV96 503 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 LCHNA4D1U4 455 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 LINC01553A4QN01 128 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 WDR64B1ANS9 1081 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 M0R2N6 131 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 ARHGEF15O94989 841 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 GHRP10912 638 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 XBP1P17861 261 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 CYP3A7P24462 503 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 IGBP1P78318 339 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 MRPS5P82675 430 aaKnown RBP14.28□□□□□ -0.12
SNX6-207ENST00000556303 LPIN1Q14693 890 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 Q4G0T1 1027 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 SWSAP1Q6NVH7 229 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 MTHFD1LQ6UB35 978 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 CCDC60Q8IWA6 550 aaPredicted RBP14.28□□□□□ -0.12
SNX6-207ENST00000556303 PPM1EQ8WY54 764 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 LENG9Q96B70 501 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 FAM167AQ96KS9 214 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 SLKQ9H2G2 1235 aaPredicted RBP14.28□□□□□ -0.12
SNX6-207ENST00000556303 TRPV2Q9Y5S1 764 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
SNX6-207ENST00000556303 TTC3P53804 2025 aa14.27□□□□□ -0.12
SNX6-207ENST00000556303 MYH9P35579 1960 aaKnown RBP14.27□□□□□ -0.12
SNX6-207ENST00000556303 STK36Q9NRP7 1315 aa14.27□□□□□ -0.12
SNX6-207ENST00000556303 EPOPA6NHQ4 379 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 ENPP3O14638 875 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 ADAMTS3O15072 1205 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 LPXNO60711 386 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 PFKFB2O60825 505 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 KLRC1P26715 233 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 SFNP31947 248 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 GRB10Q13322 594 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 AAK1Q2M2I8 961 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 TMCO2Q7Z6W1 182 aaPredicted RBP14.27□□□□□ -0.13
SNX6-207ENST00000556303 BLIDQ8IZY5 108 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 RDM1Q8NG50 284 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 RASGRP4Q8TDF6 673 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 TBCKQ8TEA7 893 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 YME1L1Q96TA2 773 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 CELF4Q9BZC1 486 aaKnown RBP14.27□□□□□ -0.13
SNX6-207ENST00000556303 CERS4Q9HA82 394 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 SUGCTQ9HAC7 445 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 COG5Q9UP83 839 aa14.27□□□□□ -0.13
SNX6-207ENST00000556303 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 BRWD1Q9NSI6 2320 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 IGSF9BQ9UPX0 1349 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
SNX6-207ENST00000556303 RFXAPO00287 272 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 MSH4O15457 936 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 MAGEB2O15479 319 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 EDIL3O43854 480 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 PPFIA3O75145 1194 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 ATP4AP20648 1035 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 SCRN1Q12765 414 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 CCDC85BQ15834 202 aaPredicted RBP14.26□□□□□ -0.13
SNX6-207ENST00000556303 WASF1Q92558 559 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 ASB2Q96Q27 587 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 OSBPL7Q9BZF2 842 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 FAM49AQ9H0Q0 323 aaPredicted RBP14.26□□□□□ -0.13
SNX6-207ENST00000556303 DISC1Q9NRI5 854 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 NRBP2Q9NSY0 501 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 RWDD3Q9Y3V2 267 aa14.26□□□□□ -0.13
SNX6-207ENST00000556303 GAS7O60861 476 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 RB1P06400 928 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 JAK3P52333 1124 aa14.25□□□□□ -0.13
SNX6-207ENST00000556303 STK3Q13188 491 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms