RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 TFAMQ00059 246 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 RASSF7Q02833 373 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 KCTD6Q8NC69 237 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 COA7Q96BR5 231 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 MTIF3Q9H2K0 278 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 KCND2Q9NZV8 630 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 SEPT10Q9P0V9 454 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 ASAP1Q9ULH1 1129 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 IQCA1LA6NCM1 817 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 RPLP2P05387 115 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 KRT7P08729 469 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 KLHL38Q2WGJ6 581 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 ITPRIPL1Q6GPH6 555 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 DARS2Q6PI48 645 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
ACTN1-216ENST00000556083 MSTO1Q9BUK6 570 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
ACTN1-216ENST00000556083 METP08581 1390 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 hCG_1642624A0A1W2PR95 340 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 SMAPO00193 183 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 MAP3K7O43318 606 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 SRGAP2CP0DJJ0 459 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 GUCY2FP51841 1108 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 NECTIN1Q15223 517 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 PFKFB3Q16875 520 aaPredicted RBP11.52□□□□□ -0.56
ACTN1-216ENST00000556083 FSCBQ5H9T9 825 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 URGCPQ8TCY9 931 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 LRRC37BQ96QE4 947 aa11.52□□□□□ -0.56
ACTN1-216ENST00000556083 DDX56Q9NY93 547 aaKnown RBP11.52□□□□□ -0.56
ACTN1-216ENST00000556083 MED14O60244 1454 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 GRID2IPA4D2P6 1211 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 NNMTP40261 264 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 EPHB1P54762 984 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 RAD51Q06609 339 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 ZBTB17Q13105 803 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 TTLL4Q14679 1199 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 DSTYKQ6XUX3 929 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 PSMB7Q99436 277 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 DPH5Q9H2P9 285 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 SLC13A4Q9UKG4 626 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 MAN1B1Q9UKM7 699 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 ANGPTL2Q9UKU9 493 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 BUB1O43683 1085 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 DCTN3O75935 186 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 P4HBP07237 508 aaKnown RBP11.52□□□□□ -0.57
ACTN1-216ENST00000556083 CCT5P48643 541 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 ARL4CP56559 192 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 PPP2R5CQ13362 524 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 ERFEQ4G0M1 354 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 PPP2R3CQ969Q6 453 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 ZNF560Q96MR9 790 aa11.52□□□□□ -0.57
ACTN1-216ENST00000556083 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-216ENST00000556083 PSMD3O43242 534 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 ORC4O43929 436 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 NDUFA10O95299 355 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 XRRA1Q6P2D8 792 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 WDR75Q8IWA0 830 aaKnown RBP11.51□□□□□ -0.57
ACTN1-216ENST00000556083 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 UTYO14607 1347 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 ASAP2O43150 1006 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 KCNQ3O43525 872 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 ALKBH5Q6P6C2 394 aaKnown RBP11.51□□□□□ -0.57
ACTN1-216ENST00000556083 CATSPER4Q7RTX7 472 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 CCNYQ8ND76 341 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 EDC3Q96F86 508 aaKnown RBP11.51□□□□□ -0.57
ACTN1-216ENST00000556083 SUN2Q9UH99 717 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 MAGI3Q5TCQ9 1506 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 USP31Q70CQ4 1352 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 PI4K2BQ8TCG2 481 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 FMO2Q99518 471 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 DNAJC17Q9NVM6 304 aaKnown RBP11.51□□□□□ -0.57
ACTN1-216ENST00000556083 ZSWIM5Q9P217 1185 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 PNPLA7Q6ZV29 1317 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 TET3O43151 1660 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 RASGRF2O14827 1237 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 HUS1O60921 280 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 DDIT3P35638 169 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 INPP1P49441 399 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 TTC23LQ6PF05 361 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-216ENST00000556083 HPCAL4Q9UM19 191 aa11.51□□□□□ -0.57
ACTN1-216ENST00000556083 ADCY10Q96PN6 1610 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 ADORA1P30542 326 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 STAT3P40763 770 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 RESTQ13127 1097 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SNCBQ16143 134 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-216ENST00000556083 C1orf228Q6PIY5 440 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SAMD3Q8N6K7 520 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 FOXP3Q9BZS1 431 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-216ENST00000556083 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SENP1Q9P0U3 644 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 CHUKO15111 745 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 CLDN3O15551 220 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms