RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SMIM10L2AP0DMW4 78 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 SMIM10L2BP0DMW5 78 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 ICAM3P32942 547 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 DEFB103AP81534 67 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 TAP1Q03518 808 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 RBL2Q08999 1139 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 SEMA3FQ13275 785 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 IKBKEQ14164 716 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 UBE2SQ16763 222 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 BMP2KLQ5H9B9 411 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 KRT40Q6A162 431 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 NLRX1Q86UT6 975 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 SERINC5Q86VE9 423 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 FANCBQ8NB91 859 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 RDH13Q8NBN7 331 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 SPIRE2Q8WWL2 714 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 FAM122AQ96E09 287 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 NECAB3Q96P71 396 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-216ENST00000556066 NEK1Q96PY6 1258 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 UHRF1Q96T88 793 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-216ENST00000556066 GPR20Q99678 358 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 RNPEPQ9H4A4 650 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 SETD4Q9NVD3 440 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 ZNF215Q9UL58 517 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-216ENST00000556066 MTUS1Q9ULD2 1270 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 TELO2Q9Y4R8 837 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 SIP14410 1827 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 BRWD1Q9NSI6 2320 aa7.68□□□□□ -1.18
PSEN1-216ENST00000556066 XIRP2A4UGR9 3374 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 NLRC5Q86WI3 1866 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 LCHNA4D1U4 455 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 EPOPA6NHQ4 379 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 LGR5O75473 907 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 CXCL10P02778 98 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 GNAT1P11488 350 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 GCGRP47871 477 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 MRPS5P82675 430 aaKnown RBP7.67□□□□□ -1.18
PSEN1-216ENST00000556066 ARHGAP4P98171 946 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 FGD1P98174 961 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 MBTPS1Q14703 1052 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 TCTN1Q2MV58 587 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 TRIM71Q2Q1W2 868 aaKnown RBP7.67□□□□□ -1.18
PSEN1-216ENST00000556066 XRRA1Q6P2D8 792 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 APOA5Q6Q788 366 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 TMTC3Q6ZXV5 915 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 SPRED2Q7Z698 418 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 GIMAP8Q8ND71 665 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-216ENST00000556066 DBF4BQ8NFT6 615 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 CCDC136Q96JN2 1154 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 PCDHA6Q9UN73 950 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 PCDHA8Q9Y5H6 950 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 EMSYQ7Z589 1322 aa7.67□□□□□ -1.18
PSEN1-216ENST00000556066 MYH9P35579 1960 aaKnown RBP7.66□□□□□ -1.18
PSEN1-216ENST00000556066 ZBTB43O43298 467 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 EFCAB14O75071 495 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 ATP9AO75110 1047 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 CDC45O75419 566 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 GJB5O95377 273 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 AMHP03971 560 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 BMP1P13497 986 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 ITGB5P18084 799 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 MARK3P27448 753 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 TCF7P36402 384 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-216ENST00000556066 NAPAP54920 295 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 TFF2Q03403 129 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 MTMR1Q13613 665 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 RTN1Q16799 776 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 ADCK5Q3MIX3 580 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 WWC2Q6AWC2 1192 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.66□□□□□ -1.18
PSEN1-216ENST00000556066 DHX32Q7L7V1 743 aaKnown RBP7.66□□□□□ -1.18
PSEN1-216ENST00000556066 SGMS1Q86VZ5 419 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 MYOCDQ8IZQ8 938 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 GLG1Q92896 1179 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 GPRASP2Q96D09 838 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 CDHR1Q96JP9 859 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 PGBD1Q96JS3 809 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 RAD9AQ99638 391 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 SENP7Q9BQF6 1050 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 EHMT1Q9H9B1 1298 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 RBM28Q9NW13 759 aaKnown RBP7.66□□□□□ -1.18
PSEN1-216ENST00000556066 BRPF3Q9ULD4 1205 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 MTCH2Q9Y6C9 303 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 EVPLQ92817 2033 aa7.66□□□□□ -1.18
PSEN1-216ENST00000556066 KLF18A0A0U1RQI7 1052 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 GOLGA8AA7E2F4 631 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 GOLGA8BA8MQT2 603 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 DGAT1O75907 488 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 UPP2O95045 317 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 KCNA2P16389 499 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 IGBP1P78318 339 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 EXOSC10Q01780 885 aaKnown RBP7.65□□□□□ -1.18
PSEN1-216ENST00000556066 PPFIA1Q13136 1202 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 GRB10Q13322 594 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 MYO7AQ13402 2215 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 KRT32Q14532 448 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 PLEKHG4Q58EX7 1191 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 GDPD5Q8WTR4 605 aa7.65□□□□□ -1.18
PSEN1-216ENST00000556066 SEPT1Q8WYJ6 367 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms