RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 ZSCAN5CA6NGD5 496 aaPredicted RBP11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 H0Y3Z8 333 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 TEX28O15482 410 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 KCNQ3O43525 872 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 DIAPH2O60879 1101 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 DNAJC8O75937 253 aaPredicted RBP11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 COPB1P53618 953 aaKnown RBP11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 CYP27A1Q02318 531 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 COX10Q12887 443 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 DYNC1I2Q13409 638 aaKnown RBP11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 EXOC3L1Q86VI1 746 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 GRAMD2AQ8IUY3 354 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 ZNF280CQ8ND82 737 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 MAIP1Q8WWC4 291 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 WDR35Q9P2L0 1181 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 LUC7L2Q9Y383 392 aaKnown RBP11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 GLI3P10071 1580 aa11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
EFCAB11-208ENST00000555872 TRAPPC3O43617 180 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PENKP01210 267 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PIK3CAP42336 1068 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 SF3A3Q12874 501 aaKnown RBP eCLIP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 BNIP1Q12981 228 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 BYSLQ13895 437 aaKnown RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 TTF1Q15361 905 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 ZNF790Q6PG37 636 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 WDR59Q6PJI9 974 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 KRT27Q7Z3Y8 459 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 CCT6BQ92526 530 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 RUBCNQ92622 972 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 USP6NLQ92738 828 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 FBXO2Q9UK22 296 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 SCINQ9Y6U3 715 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 IQCA1LA6NCM1 817 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 UBE2Q2LH0YL09 131 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 MAP3K13O43283 966 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 TMCC1O94876 653 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PRLRP16471 622 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PDE6CP51160 858 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 GSTM4Q03013 218 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 DPYDQ12882 1025 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 GKAP1Q5VSY0 366 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 CRELD2Q6UXH1 353 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 CABP7Q86V35 215 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 ARHGAP18Q8N392 663 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 ARFGAP2Q8N6H7 521 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 TEKT4Q8WW24 435 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 RPGRQ92834 1020 aaKnown RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 EPSTI1Q96J88 318 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 FAM167BQ9BTA0 163 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 C2CD2Q9Y426 696 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 TNS2Q63HR2 1409 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 CARNS1A5YM72 827 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 SRRM3A6NNA2 597 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 MGEA5O60502 916 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 GLI1P08151 1106 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 IDO1P14902 403 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 BTF3P20290 206 aaKnown RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PTPREP23469 700 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 NFRKBQ6P4R8 1299 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 KSR2Q6VAB6 950 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 CPLX4Q7Z7G2 160 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 TBC1D1Q86TI0 1168 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 AGAP11Q8TF27 550 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 PALLDQ8WX93 1383 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 OPTNQ96CV9 577 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 GLT8D2Q9H1C3 349 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 EPB41L5Q9HCM4 733 aa11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 DBF4Q9UBU7 674 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 LIMA1Q9UHB6 759 aaKnown RBP11.22□□□□□ -0.61
EFCAB11-208ENST00000555872 RFX7Q2KHR2 1363 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 PHF20L1A8MW92 1017 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 LIN7AO14910 233 aaPredicted RBP11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 PPIP5K2O43314 1243 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 PFDN1O60925 122 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 LDHBP07195 334 aaKnown RBP11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 TROVE2P10155 538 aaKnown RBP eCLIP11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 GUCY2DQ02846 1103 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 KIF5AQ12840 1032 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 BLMHQ13867 455 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 ODF2Q5BJF6 829 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 UNC5DQ6UXZ4 953 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 DAAM2Q86T65 1068 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 RSPH3Q86UC2 560 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 IFT20Q8IY31 132 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 CCDC63Q8NA47 563 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 TNIP2Q8NFZ5 429 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 RBM12Q9NTZ6 932 aaKnown RBP11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 PANK4Q9NVE7 773 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 ATAD3AQ9NVI7 634 aa11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 NOP53Q9NZM5 478 aaKnown RBP11.21□□□□□ -0.61
EFCAB11-208ENST00000555872 ZNF180Q9UJW8 692 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms