RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 STXBP2Q15833 593 aa13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 CALCRLQ16602 461 aa13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 GPRASP2Q96D09 838 aa13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 MPHOSPH6Q99547 160 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 LMCD1Q9NZU5 365 aa13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 PTPRZ1P23471 2315 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-211ENST00000555709 TECTAO75443 2155 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 GRXCR2A6NFK2 248 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 ASB14A6NK59 587 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 B4DLN1 442 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 EIF3JO75822 258 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 MARCKSP29966 332 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 MCM4P33991 863 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 NKX3-2P78367 333 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 PDE4DQ08499 809 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 MTMR1Q13613 665 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 IL17AQ16552 155 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 MSL3Q8N5Y2 521 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 SLC5A5Q92911 643 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 KATNBL1Q9H079 304 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 KCNH7Q9NS40 1196 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 PCDHA7Q9UN72 937 aa13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-211ENST00000555709 DOCK5Q9H7D0 1870 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 GRIN2DO15399 1336 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 ARP10275 920 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 KCNA5P22460 613 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 ICAM3P32942 547 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 ME1P48163 572 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 GRIN1Q05586 938 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 PTCRAQ6ISU1 281 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 NLRX1Q86UT6 975 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 FBXO16Q8IX29 292 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 SCLYQ96I15 445 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 MFSD14AQ96MC6 490 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 AGO4Q9HCK5 861 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 LMBRD1Q9NUN5 540 aa13.21□□□□□ -0.29
MTHFD1-211ENST00000555709 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 GOLGA6L22H0YM25 854 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 CUTAO60888 179 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 PFKMP08237 780 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.35e-7■■■■■ 28.6
MTHFD1-211ENST00000555709 PTPN5P54829 565 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 ITGB3BPQ13352 177 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 GNPTABQ3T906 1256 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 PHOSPHO2Q8TCD6 241 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 GJA10Q969M2 543 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 FAM20AQ96MK3 541 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 CLIC6Q96NY7 704 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 SLC9A7Q96T83 725 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 VTA1Q9NP79 307 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 ZHX1Q9UKY1 873 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 CACNA1BQ00975 2339 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
MTHFD1-211ENST00000555709 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 VWA3AA6NCI4 1184 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 MAFGO15525 162 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 DHX15O43143 795 aaKnown RBP13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 B4GALT4O60513 344 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 GFRA3O60609 400 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 GADD45BO75293 160 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 PSMD10O75832 226 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 KCNA2P16389 499 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 TCF15Q12870 199 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 IER5LQ5T953 404 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 B3GNT9Q6UX72 402 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 DTHD1Q6ZMT9 781 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 HERC6Q8IVU3 1022 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 IGSF22Q8N9C0 903 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 GDPD5Q8WTR4 605 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 RIT2Q99578 217 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 ZNF577Q9BSK1 485 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 TTC12Q9H892 705 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-211ENST00000555709 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
MTHFD1-211ENST00000555709 WDR81Q562E7 1941 aa13.18□□□□□ -0.3
MTHFD1-211ENST00000555709 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms