RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 BCAS3Q9H6U6 928 aa5.24□□□□□ -1.57
FOXN3-210ENST00000555658 IFT57Q9NWB7 429 aa5.24□□□□□ -1.57
FOXN3-210ENST00000555658 USP35Q9P2H5 1018 aa5.24□□□□□ -1.57
FOXN3-210ENST00000555658 GULP1Q9UBP9 304 aa5.24□□□□□ -1.57
FOXN3-210ENST00000555658 RCAN3Q9UKA8 241 aa5.24□□□□□ -1.57
FOXN3-210ENST00000555658 MYRFQ9Y2G1 1151 aa5.24□□□□□ -1.57
FOXN3-210ENST00000555658 XIRP1Q702N8 1843 aaKnown RBP5.24□□□□□ -1.57
FOXN3-210ENST00000555658 MED1Q15648 1581 aaPredicted RBP5.24□□□□□ -1.57
FOXN3-210ENST00000555658 TRPM3Q9HCF6 1732 aaPredicted RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 EPHX1P07099 455 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 HSP90AB1P08238 724 aaKnown RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 HMGB1P09429 215 aaKnown RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 TEFQ10587 303 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 GRB10Q13322 594 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 DCTN1Q14203 1278 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 WWC2Q6AWC2 1192 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 MCM10Q7L590 875 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 CPNE8Q86YQ8 564 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 DCP2Q8IU60 420 aaKnown RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 IFNL2Q8IZJ0 200 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 C19orf47Q8N9M1 422 aaKnown RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 CPLX3Q8WVH0 158 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 DDX11Q96FC9 970 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 THUMPD2Q9BTF0 503 aaKnown RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 KLHL25Q9H0H3 589 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 AP5M1Q9H0R1 490 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.572e-6■■□□□ 12.3
FOXN3-210ENST00000555658 CGGBP1Q9UFW8 167 aaPredicted RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 PLA2G2DQ9UNK4 145 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 EFR3BQ9Y2G0 817 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 CCDC9Q9Y3X0 531 aaKnown RBP5.23□□□□□ -1.57
FOXN3-210ENST00000555658 ROBO1Q9Y6N7 1651 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 ABCC6O95255 1503 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 LTBP3Q9NS15 1303 aa5.23□□□□□ -1.57
FOXN3-210ENST00000555658 USP54Q70EL1 1684 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 ALS2Q96Q42 1657 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 MAP3K5Q99683 1374 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 PLEKHG2Q9H7P9 1386 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 EXOC5O00471 708 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 CHL1O00533 1208 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 NOBOXO60393 691 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 FUCA1P04066 466 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 NAT2P11245 290 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 KIAA2012Q0VF49 1180 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 TAF7Q15545 349 aaPredicted RBP5.22□□□□□ -1.57
FOXN3-210ENST00000555658 BORAQ6PGQ7 559 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 POMZP3Q6PJE2 187 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 ZC3H18Q86VM9 953 aaKnown RBP5.22□□□□□ -1.57
FOXN3-210ENST00000555658 UNC5CLQ8IV45 518 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.22□□□□□ -1.57
FOXN3-210ENST00000555658 IL17REQ8NFR9 667 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 ZNF428Q96B54 188 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 C8orf37Q96NL8 207 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 LNPKQ9C0E8 428 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 GINM1Q9NU53 330 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 BABAM1Q9NWV8 329 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 SMPD4Q9NXE4 827 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 DDX41Q9UJV9 622 aaKnown RBP5.22□□□□□ -1.57
FOXN3-210ENST00000555658 PCDHB10Q9UN67 800 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 THRAP3Q9Y2W1 955 aaKnown RBP5.22□□□□□ -1.57
FOXN3-210ENST00000555658 NHSL1Q5SYE7 1610 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 CRB1P82279 1406 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 FANCIQ9NVI1 1328 aa5.22□□□□□ -1.57
FOXN3-210ENST00000555658 PEAK1Q9H792 1746 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 NOP56O00567 594 aaKnown RBP5.21□□□□□ -1.58
FOXN3-210ENST00000555658 RNMTO43148 476 aaKnown RBP5.21□□□□□ -1.58
FOXN3-210ENST00000555658 ZNF853P0CG23 659 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 PHKG2P15735 406 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 MAGEA10P43363 369 aaPredicted RBP5.21□□□□□ -1.58
FOXN3-210ENST00000555658 KRTAP10-2P60368 255 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 EXOSC9Q06265 439 aaKnown RBP5.21□□□□□ -1.58
FOXN3-210ENST00000555658 PAK2Q13177 524 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 SMAD4Q13485 552 aaKnown RBP5.21□□□□□ -1.58
FOXN3-210ENST00000555658 ARHGEF39Q8N4T4 335 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 TSR2Q969E8 191 aaKnown RBP5.21□□□□□ -1.58
FOXN3-210ENST00000555658 RCC1LQ96I51 464 aaKnown RBP5.21□□□□□ -1.58
FOXN3-210ENST00000555658 MCMBPQ9BTE3 642 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 TSPYL4Q9UJ04 414 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 AKT3Q9Y243 479 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 SHPRHQ149N8 1683 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 CAMTA1Q9Y6Y1 1673 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 SPATA31A1Q5TZJ5 1347 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 PCDH11XQ9BZA7 1347 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 PCDH11YQ9BZA8 1340 aa5.21□□□□□ -1.58
FOXN3-210ENST00000555658 COL5A2P05997 1499 aaPredicted RBP5.2□□□□□ -1.58
FOXN3-210ENST00000555658 ANKRD34BA5PLL1 514 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 SCAMP3O14828 347 aaKnown RBP5.2□□□□□ -1.58
FOXN3-210ENST00000555658 NTRK1P04629 796 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 CANXP27824 592 aaKnown RBP5.2□□□□□ -1.58
FOXN3-210ENST00000555658 VPS72Q15906 364 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 TMCO4Q5TGY1 634 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 ETV3LQ6ZN32 361 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 ZNF761Q86XN6 746 aaPredicted RBP5.2□□□□□ -1.58
FOXN3-210ENST00000555658 GPRASP2Q96D09 838 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 LOXL4Q96JB6 756 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 YIPF4Q9BSR8 244 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 MTA3Q9BTC8 594 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 MIS18AQ9NYP9 233 aa5.2□□□□□ -1.58
FOXN3-210ENST00000555658 NCAPD2Q15021 1401 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms