RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TMEM62Q0P6H9 643 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 SWSAP1Q6NVH7 229 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 MTHFD1LQ6UB35 978 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 ABHD15Q6UXT9 468 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 FIBCD1Q8N539 461 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 SP7Q8TDD2 431 aaPredicted RBP17.5■□□□□ 0.39
SNX6-205ENST00000555648 RASGRP4Q8TDF6 673 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 ATP8B4Q8TF62 1192 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 TRAPPC12Q8WVT3 735 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 ZBTB10Q96DT7 871 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 FTHL17Q9BXU8 183 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 SH3GLB2Q9NR46 395 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 GINS2Q9Y248 185 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 GBF1Q92538 1859 aa17.5■□□□□ 0.39
SNX6-205ENST00000555648 SMIM35A0A1B0GVV1 85 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 RBAK-RBAKDNI3L0D1 243 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 KLRC1P26715 233 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 CD52P31358 61 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 EVCP57679 992 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 PAK2Q13177 524 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 NTRK3Q16288 839 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 EPC2Q52LR7 807 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 ZNF484Q5JVG2 852 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 ZNF746Q6NUN9 644 aaPredicted RBP17.49■□□□□ 0.39
SNX6-205ENST00000555648 SMAP1Q8IYB5 467 aaPredicted RBP17.49■□□□□ 0.39
SNX6-205ENST00000555648 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
SNX6-205ENST00000555648 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
SNX6-205ENST00000555648 TM6SF1Q9BZW5 370 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 PDRG1Q9NUG6 133 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 SQORQ9Y6N5 450 aa17.49■□□□□ 0.39
SNX6-205ENST00000555648 IGLV3-22A0A075B6J6 115 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 IGKV6D-21A0A0A0MT36 114 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 ENPP3O14638 875 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 STK3Q13188 491 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 GPM6BQ13491 265 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 TOB2Q14106 344 aaPredicted RBP17.48■□□□□ 0.39
SNX6-205ENST00000555648 ODR4Q5SWX8 454 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
SNX6-205ENST00000555648 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
SNX6-205ENST00000555648 TMEM192Q8IY95 271 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
SNX6-205ENST00000555648 RWDD3Q9Y3V2 267 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 PCDHA10Q9Y5I2 948 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 COL1A2P08123 1366 aa17.48■□□□□ 0.39
SNX6-205ENST00000555648 DHX15O43143 795 aaKnown RBP17.47■□□□□ 0.39
SNX6-205ENST00000555648 DEXIO95424 95 aa17.47■□□□□ 0.39
SNX6-205ENST00000555648 CIITAP33076 1130 aa17.47■□□□□ 0.39
SNX6-205ENST00000555648 USP11P51784 963 aa17.47■□□□□ 0.39
SNX6-205ENST00000555648 BTG3Q14201 252 aaPredicted RBP17.47■□□□□ 0.39
SNX6-205ENST00000555648 CRYGNQ8WXF5 182 aa17.47■□□□□ 0.39
SNX6-205ENST00000555648 BBXQ8WY36 941 aaPredicted RBP17.47■□□□□ 0.39
SNX6-205ENST00000555648 MRPL38Q96DV4 380 aaKnown RBP17.47■□□□□ 0.39
SNX6-205ENST00000555648 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
SNX6-205ENST00000555648 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
SNX6-205ENST00000555648 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
SNX6-205ENST00000555648 LRFN2Q9ULH4 789 aa17.47■□□□□ 0.39
SNX6-205ENST00000555648 CEP131Q9UPN4 1083 aa17.47■□□□□ 0.39
SNX6-205ENST00000555648 WDR64B1ANS9 1081 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 GAS7O60861 476 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 CDKL5O76039 1030 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 STAG3L1P0CL83 205 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
SNX6-205ENST00000555648 CTNNB1P35222 781 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 KCNQ1P51787 676 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 NFX1Q12986 1120 aaKnown RBP17.46■□□□□ 0.39
SNX6-205ENST00000555648 TIGD5Q53EQ6 642 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 METTL13Q8N6R0 699 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 FAM167AQ96KS9 214 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 GABBR1Q9UBS5 961 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 PADI3Q9ULW8 664 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 PCDHA4Q9UN74 947 aa17.46■□□□□ 0.39
SNX6-205ENST00000555648 CUL9Q8IWT3 2517 aa17.46■□□□□ 0.38
SNX6-205ENST00000555648 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.38
SNX6-205ENST00000555648 IGSF9BQ9UPX0 1349 aa17.46■□□□□ 0.38
SNX6-205ENST00000555648 H3BNC9 293 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 BMP1P13497 986 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 XBP1P17861 261 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 GALNT17Q6IS24 598 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 FAM43BQ6ZT52 329 aaPredicted RBP17.45■□□□□ 0.38
SNX6-205ENST00000555648 TBCKQ8TEA7 893 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 C11orf84Q9BUA3 381 aaPredicted RBP17.45■□□□□ 0.38
SNX6-205ENST00000555648 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
SNX6-205ENST00000555648 NRBP2Q9NSY0 501 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
SNX6-205ENST00000555648 CDH23Q9H251 3354 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 ADGRA3Q8IWK6 1321 aa17.45■□□□□ 0.38
SNX6-205ENST00000555648 MAGEB2O15479 319 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 CHMP2AO43633 222 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
SNX6-205ENST00000555648 RPS6KA5O75582 802 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 RB1P06400 928 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 TMOD1P28289 359 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 LRCH2Q5VUJ6 765 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 NPAS4Q8IUM7 802 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 BLIDQ8IZY5 108 aa17.44■□□□□ 0.38
SNX6-205ENST00000555648 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
SNX6-205ENST00000555648 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
SNX6-205ENST00000555648 RIT2Q99578 217 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms