RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CBX8Q9HC52 389 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 WRAP73Q9P2S5 460 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 GABBR1Q9UBS5 961 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 ZHX1Q9UKY1 873 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 TELO2Q9Y4R8 837 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 SYNGAP1Q96PV0 1343 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 WDR81Q562E7 1941 aa10.76□□□□□ -0.69
HNRNPC-220ENST00000555585 ZSWIM8A7E2V4 1837 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 NPHP3-ACAD11A0A0J9YXS1 232 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 BECN2A8MW95 431 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 GOLGA6L19H0YKK7 550 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 NOP56O00567 594 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 ZBTB39O15060 712 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 FARP2O94887 1054 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 CYP11B2P19099 503 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 BMP6P22004 513 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 SP3Q02447 781 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 RAD51AP2Q09MP3 1159 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 ACVR2BQ13705 512 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 CELF3Q5SZQ8 465 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 ZNF658Q5TYW1 1059 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 TAPT1Q6NXT6 567 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 CCDC62Q6P9F0 684 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 METTL7BQ6UX53 244 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 UNC13DQ70J99 1090 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 TRMT1LQ7Z2T5 733 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 CCDC65Q8IXS2 484 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 C4orf19Q8IY42 314 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 MSL3Q8N5Y2 521 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 AOPEPQ8N6M6 819 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 MLKLQ8NB16 471 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 USP6NLQ92738 828 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 COPS5Q92905 334 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 ATP6V0A1Q93050 837 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 APBA2Q99767 749 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 ABHD16BQ9H3Z7 469 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 ZHX3Q9H4I2 956 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 PANK4Q9NVE7 773 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 RNF186Q9NXI6 227 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 DOCK3Q8IZD9 2030 aa10.75□□□□□ -0.69
HNRNPC-220ENST00000555585 PVALEFA0A1B0GWK0 134 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 GSTTP1A0A1W2PQM5 241 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 RBM47A0AV96 593 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 RHOBTB3O94955 611 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 ATG7O95352 703 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 LYPLA2O95372 231 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 GH1P01241 217 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 HOXC6P09630 235 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 XRCC6P12956 609 aaKnown RBP eCLIP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 CTGFP29279 349 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 YWHABP31946 246 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 ADCYAP1R1P41586 468 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 LACTBP83111 547 aaPredicted RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 CCL14Q16627 93 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 UVSSAQ2YD98 709 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 ARSHQ5FYA8 562 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 XKR9Q5GH70 373 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 UTP14CQ5TAP6 766 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 FAM160B1Q5W0V3 765 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 RINT1Q6NUQ1 792 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 CNNM4Q6P4Q7 775 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 OTUD6AQ7L8S5 288 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 LUZP1Q86V48 1076 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 CCDC60Q8IWA6 550 aaPredicted RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 SMYD4Q8IYR2 804 aaPredicted RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 SEPT1Q8WYJ6 367 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 DNAJC19Q96DA6 116 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 SPATA33Q96N06 139 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 BPIFA3Q9BQP9 254 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 RUSC1Q9BVN2 902 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 GTPBP4Q9BZE4 634 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 ARHGAP39Q9C0H5 1083 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 ZNF302Q9NR11 478 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 DBR1Q9UK59 544 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 GJD2Q9UKL4 321 aa10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 MYH9P35579 1960 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-220ENST00000555585 SMTNL1A8MU46 457 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 TBCAO75347 108 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 FAM13AO94988 1023 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 TCF7P36402 384 aaPredicted RBP10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 TPM4P67936 248 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 COASYQ13057 564 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 PSMD2Q13200 908 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 STIM1Q13586 685 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 LAMC2Q13753 1193 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 GIT2Q14161 759 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 IQCB1Q15051 598 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 PRAMEF19Q5SWL8 479 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 TMEM63BQ5T3F8 832 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 OLFML2BQ68BL8 750 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 IQSEC1Q6DN90 963 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 KLHL10Q6JEL2 608 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 ANP32BQ92688 251 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 TRIM47Q96LD4 638 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 KATNBL1Q9H079 304 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 AZI2Q9H6S1 392 aa10.73□□□□□ -0.69
HNRNPC-220ENST00000555585 ANKEF1Q9NU02 776 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms