RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 BLACEA4D250 179 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 KLF4O43474 513 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 CUTAO60888 179 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 SOD2P04179 222 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 ATP2B1P20020 1258 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 ACRV1P26436 265 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 MSX2P35548 267 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-216ENST00000555550 ADCY8P40145 1251 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 NTRK3Q16288 839 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 BTBD8Q5XKL5 378 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 DPP8Q6V1X1 898 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-216ENST00000555550 ZNF627Q7L945 461 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 DCAF4Q8WV16 495 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 ZG16BQ96DA0 208 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 KIAA1683Q9H0B3 1180 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 IPPKQ9H8X2 491 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 TLR9Q9NR96 1032 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 CDC42EP3Q9UKI2 254 aa5.99□□□□□ -1.45
SCFD1-216ENST00000555550 PRODHO43272 600 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 KCNQ1P51787 676 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 RAB33AQ14088 237 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 SGMS1Q86VZ5 419 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 SCYL1Q96KG9 808 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 ZDHHC5Q9C0B5 715 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 RIC8BQ9NVN3 520 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 PLA2G3Q9NZ20 509 aa5.98□□□□□ -1.45
SCFD1-216ENST00000555550 PUF60Q9UHX1 559 aaKnown RBP5.98□□□□□ -1.45
SCFD1-216ENST00000555550 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 FAM90A27PA6NNH2 459 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 ARHGAP6O43182 974 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 ADH4P08319 380 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 ETV4P43268 484 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 GPR85P60893 370 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 HSP90AA2PQ14568 343 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-216ENST00000555550 IFNL3Q8IZI9 196 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 CFHR4Q92496 578 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 AGAP2Q99490 1192 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 SLC2A4RGQ9NR83 387 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 ARHGAP28Q9P2N2 729 aa5.97□□□□□ -1.45
SCFD1-216ENST00000555550 CCDC85CA6NKD9 419 aa5.96□□□□□ -1.46
SCFD1-216ENST00000555550 FAM47E-STBD1D6RA91 191 aa5.96□□□□□ -1.46
SCFD1-216ENST00000555550 HMGCRP04035 888 aa5.96□□□□□ -1.46
SCFD1-216ENST00000555550 GTF2F1P35269 517 aaKnown RBP eCLIP5.96□□□□□ -1.46
SCFD1-216ENST00000555550 RPS19P39019 145 aaKnown RBP5.96□□□□□ -1.46
SCFD1-216ENST00000555550 ZNF483Q8TF39 744 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-216ENST00000555550 CLIP3Q96DZ5 547 aa5.96□□□□□ -1.46
SCFD1-216ENST00000555550 AARSD1Q9BTE6 412 aaKnown RBP5.96□□□□□ -1.46
SCFD1-216ENST00000555550 HECAQ9UBI9 543 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-216ENST00000555550 REXO2Q9Y3B8 237 aaKnown RBP5.96□□□□□ -1.46
SCFD1-216ENST00000555550 PTPN1P18031 435 aaKnown RBP5.95□□□□□ -1.46
SCFD1-216ENST00000555550 MAKP20794 623 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 IL13RA1P78552 427 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 NFYCQ13952 458 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 GRM7Q14831 915 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 USP30Q70CQ3 517 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 ASXL2Q76L83 1435 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 GPR135Q8IZ08 494 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 ST13P5Q8NFI4 369 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-216ENST00000555550 OSBP2Q969R2 916 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 TMEM176AQ96HP8 235 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 SGSM3Q96HU1 749 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 CRAMP1Q96RY5 1269 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 CEP72Q9P209 647 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 DMRT1Q9Y5R6 373 aa5.95□□□□□ -1.46
SCFD1-216ENST00000555550 PPFIA2O75334 1257 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 PABPC1P11940 636 aaKnown RBP5.94□□□□□ -1.46
SCFD1-216ENST00000555550 PCOLCEQ15113 449 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 STYK1Q6J9G0 422 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 NSMFQ6X4W1 530 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 ARHGAP36Q6ZRI8 547 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 FILIP1Q7Z7B0 1213 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 MRGPRGQ86SM5 289 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 LRRC47Q8N1G4 583 aaKnown RBP5.94□□□□□ -1.46
SCFD1-216ENST00000555550 C8orf37Q96NL8 207 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 ZFYVE21Q9BQ24 234 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 ZNF703Q9H7S9 590 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-216ENST00000555550 TNFRSF18Q9Y5U5 241 aa5.94□□□□□ -1.46
SCFD1-216ENST00000555550 YOD1Q5VVQ6 348 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-216ENST00000555550 SPTY2D1Q68D10 685 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-216ENST00000555550 OSTM1Q86WC4 334 aa5.93□□□□□ -1.46
SCFD1-216ENST00000555550 D2HGDHQ8N465 521 aa5.93□□□□□ -1.46
SCFD1-216ENST00000555550 OR14K1Q8NGZ2 314 aa5.93□□□□□ -1.46
SCFD1-216ENST00000555550 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-216ENST00000555550 INCENPQ9NQS7 918 aa5.93□□□□□ -1.46
SCFD1-216ENST00000555550 ARHGEF4Q9NR80 690 aa5.93□□□□□ -1.46
SCFD1-216ENST00000555550 GALNT8Q9NY28 637 aa5.93□□□□□ -1.46
SCFD1-216ENST00000555550 TRAF6Q9Y4K3 522 aa5.93□□□□□ -1.46
SCFD1-216ENST00000555550 TRAV20A0A0B4J274 112 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 PDPK1O15530 556 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 FGFR1P11362 822 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 KRT4P19013 534 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 PTGS1P23219 599 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 MC4RP32245 332 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 MRE11P49959 708 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 HHEXQ03014 270 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 EIF4HQ15056 248 aaKnown RBP5.92□□□□□ -1.46
SCFD1-216ENST00000555550 MTERF2Q49AM1 385 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 PCSK4Q6UW60 755 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 ALG1Q9BT22 464 aa5.92□□□□□ -1.46
SCFD1-216ENST00000555550 TTPALQ9BTX7 342 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms