RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	SHTN1	A0MZ66	631 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	DVL2	O14641	736 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	TSPAN6	O43657	245 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	MAFK	O60675	156 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	HIP1R	O75146	1068 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	NTRK1	P04629	796 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	SLC9A1	P19634	815 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	PI3	P19957	117 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	PRR5	P85299	388 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	PIN1	Q13526	163 aa	Predicted RBP	5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	CHRNA2	Q15822	529 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	STEAP3	Q658P3	488 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	FSTL4	Q6MZW2	842 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	CYP4F22	Q6NT55	531 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	CABP7	Q86V35	215 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	CBARP	Q8N350	705 aa	Predicted RBP	5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	HOOK2	Q96ED9	719 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	C8orf48	Q96LL4	319 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	PCIF1	Q9H4Z3	704 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	AASDHPPT	Q9NRN7	309 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	ZIM2	Q9NZV7	527 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	KCTD3	Q9Y597	815 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	NUB1	Q9Y5A7	615 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	B3GALT1	Q9Y5Z6	326 aa		5.84	□□□□□ -1.47
KTN1-222	ENST00000555506	SCD	O00767	359 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	NUAK1	O60285	661 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CLASP2	O75122	1294 aa	Known RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	SLC6A11	P48066	632 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	KIF11	P52732	1056 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	SMAD3	P84022	425 aa	Known RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	KLF1	Q13351	362 aa	Predicted RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	TERF2	Q15554	542 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	SMAD2	Q15796	467 aa	Known RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	ABCB5	Q2M3G0	1257 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	INAVA	Q3KP66	663 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CIAPIN1	Q6FI81	312 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	KCTD1	Q719H9	257 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	TMEFF1	Q8IYR6	380 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	DLG3	Q92796	817 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CCDC136	Q96JN2	1154 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	SIGLEC10	Q96LC7	697 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	ELF4	Q99607	663 aa	Predicted RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CD244	Q9BZW8	370 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	TMPRSS5	Q9H3S3	457 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	TOMM22	Q9NS69	142 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	IRAK3	Q9Y616	596 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	ATP23	Q9Y6H3	246 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	IRS2	Q9Y4H2	1338 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	HGS	O14964	777 aa	Predicted RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	SCGB1D2	O95969	90 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CYP17A1	P05093	508 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	HOXA5	P20719	270 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	FBLN1	P23142	703 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	LSP1	P33241	339 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	EPHA5	P54756	1037 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	LRRC41	Q15345	812 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	GPR158	Q5T848	1215 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CPZ	Q66K79	652 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	RASSF3	Q86WH2	238 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CAMKK2	Q96RR4	588 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	CDH19	Q9H159	772 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	BCAS3	Q9H6U6	928 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	ACSS2	Q9NR19	701 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	C14orf119	Q9NWQ9	140 aa		5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	DBR1	Q9UK59	544 aa	Known RBP	5.83	□□□□□ -1.48
KTN1-222	ENST00000555506	BUB1B	O60566	1050 aa	Predicted RBP	5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	TADA3	O75528	432 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	MYBL2	P10244	700 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	IARS	P41252	1262 aa	Known RBP	5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	SEC23A	Q15436	765 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	PTPN21	Q16825	1174 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	DCP2	Q8IU60	420 aa	Known RBP	5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	WDR75	Q8IWA0	830 aa	Known RBP	5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	CHPF	Q8IZ52	775 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	ZNF610	Q8N9Z0	462 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	NETO2	Q8NC67	525 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	SEC14L1	Q92503	715 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	SMOC1	Q9H4F8	434 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	KCNH7	Q9NS40	1196 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	SIT1	Q9Y3P8	196 aa		5.82	□□□□□ -1.48
KTN1-222	ENST00000555506	WASHC2A	Q641Q2	1341 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	SLC27A2	O14975	620 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	ABLIM3	O94929	683 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	IGFBP6	P24592	240 aa	Predicted RBP	5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	PTX3	P26022	381 aa	Predicted RBP	5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	GJA4	P35212	333 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	TBX4	P57082	545 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	LRRC32	Q14392	662 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	ZNF385B	Q569K4	471 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	FAM129C	Q86XR2	697 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	ZZZ3	Q8IYH5	903 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	PHOSPHO1	Q8TCT1	267 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	SLC13A1	Q9BZW2	595 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	AP5M1	Q9H0R1	490 aa		5.81	□□□□□ -1.48
KTN1-222	ENST00000555506	MYOT	Q9UBF9	498 aa		5.81	□□□□□ -1.48

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