RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 PCDHA12Q9UN75 941 aa23.08■■□□□ 1.29
FOXN3-209ENST00000555353 IGSF9BQ9UPX0 1349 aa23.07■■□□□ 1.28
FOXN3-209ENST00000555353 HBP1O60381 514 aa23.07■■□□□ 1.28
FOXN3-209ENST00000555353 CSF2RAP15509 400 aa23.07■■□□□ 1.28
FOXN3-209ENST00000555353 RESTQ13127 1097 aa23.07■■□□□ 1.28
FOXN3-209ENST00000555353 TRMT1LQ7Z2T5 733 aaKnown RBP23.07■■□□□ 1.28
FOXN3-209ENST00000555353 DHX38Q92620 1227 aaKnown RBP23.07■■□□□ 1.28
FOXN3-209ENST00000555353 TUBE1Q9UJT0 475 aa23.07■■□□□ 1.28
FOXN3-209ENST00000555353 TANC1Q9C0D5 1861 aa23.07■■□□□ 1.28
FOXN3-209ENST00000555353 TXKP42681 527 aa23.06■■□□□ 1.28
FOXN3-209ENST00000555353 ADAM17P78536 824 aa23.06■■□□□ 1.28
FOXN3-209ENST00000555353 BBXQ8WY36 941 aaPredicted RBP23.06■■□□□ 1.28
FOXN3-209ENST00000555353 FAM167AQ96KS9 214 aa23.06■■□□□ 1.28
FOXN3-209ENST00000555353 TTC12Q9H892 705 aaPredicted RBP23.06■■□□□ 1.28
FOXN3-209ENST00000555353 NCAPH2Q6IBW4 605 aa23.06■■□□□ 1.28
FOXN3-209ENST00000555353 SCLYQ96I15 445 aa23.06■■□□□ 1.28
FOXN3-209ENST00000555353 MTMR9Q96QG7 549 aa23.06■■□□□ 1.28
FOXN3-209ENST00000555353 TMEM60Q9H2L4 133 aa23.06■■□□□ 1.28
FOXN3-209ENST00000555353 SCN5AQ14524 2016 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 A0A1W2PPC1 479 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 EML1O00423 815 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 CKBP12277 381 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 SELPP16109 830 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 ATP4AP20648 1035 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 THPOP40225 353 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 RBL2Q08999 1139 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 RILPL1Q5EBL4 403 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 TAF2Q6P1X5 1199 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 TDHQ8IZJ6 230 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 WNT8BQ93098 351 aa23.05■■□□□ 1.28
FOXN3-209ENST00000555353 MBLAC1A4D2B0 266 aaPredicted RBP23.04■■□□□ 1.28
FOXN3-209ENST00000555353 OR52Z1P0C646 297 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 IQCF3P0C7M6 154 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 TOB1P50616 345 aaPredicted RBP23.04■■□□□ 1.28
FOXN3-209ENST00000555353 PRKCEQ02156 737 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 NBR1Q14596 966 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 UGCGQ16739 394 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 TRIM71Q2Q1W2 868 aaKnown RBP23.04■■□□□ 1.28
FOXN3-209ENST00000555353 LRRC8DQ7L1W4 858 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 RPUSD2Q8IZ73 545 aaKnown RBP23.04■■□□□ 1.28
FOXN3-209ENST00000555353 TRAPPC12Q8WVT3 735 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 NRBP2Q9NSY0 501 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 CEP131Q9UPN4 1083 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 COL1A2P08123 1366 aa23.04■■□□□ 1.28
FOXN3-209ENST00000555353 OATP04181 439 aa23.03■■□□□ 1.28
FOXN3-209ENST00000555353 EPHB4P54760 987 aa23.03■■□□□ 1.28
FOXN3-209ENST00000555353 SPIRE1Q08AE8 756 aa23.03■■□□□ 1.28
FOXN3-209ENST00000555353 ZNF484Q5JVG2 852 aa23.03■■□□□ 1.28
FOXN3-209ENST00000555353 MARCH8Q5T0T0 291 aa23.03■■□□□ 1.28
FOXN3-209ENST00000555353 BANK1Q8NDB2 785 aa23.03■■□□□ 1.28
FOXN3-209ENST00000555353 IL23AQ9NPF7 189 aa23.03■■□□□ 1.28
FOXN3-209ENST00000555353 EVPLQ92817 2033 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 ZNF862O60290 1169 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 CAND2O75155 1236 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 ACRP10323 421 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 RFC2P35250 354 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 PSMC5P62195 406 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 EPHA7Q15375 998 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 ZNF618Q5T7W0 954 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 RSPH3Q86UC2 560 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 ZNF396Q96N95 335 aaPredicted RBP23.02■■□□□ 1.28
FOXN3-209ENST00000555353 PCDHB6Q9Y5E3 794 aa23.02■■□□□ 1.28
FOXN3-209ENST00000555353 DKC1O60832 514 aaKnown RBP eCLIP23.01■■□□□ 1.274e-10■■■■■ 53.1
FOXN3-209ENST00000555353 PARNO95453 639 aaKnown RBP23.01■■□□□ 1.27
FOXN3-209ENST00000555353 P4HBP07237 508 aaKnown RBP23.01■■□□□ 1.27
FOXN3-209ENST00000555353 QARSP47897 775 aaKnown RBP23.01■■□□□ 1.27
FOXN3-209ENST00000555353 PSRC1Q6PGN9 363 aaPredicted RBP23.01■■□□□ 1.27
FOXN3-209ENST00000555353 RUFY4Q6ZNE9 571 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 DEFB128Q7Z7B8 93 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 PFKMP08237 780 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 KLRC1P26715 233 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 SHHQ15465 462 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 XKR3Q5GH77 459 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 ATL3Q6DD88 541 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 MTHFD1LQ6UB35 978 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 SEPT9Q9UHD8 586 aaPredicted RBP23.01■■□□□ 1.27
FOXN3-209ENST00000555353 PCDHA2Q9Y5H9 948 aa23.01■■□□□ 1.27
FOXN3-209ENST00000555353 RSPH10B2B2RC85 870 aa23■■□□□ 1.27
FOXN3-209ENST00000555353 RPLP2P05387 115 aaKnown RBP23■■□□□ 1.27
FOXN3-209ENST00000555353 CTSHP09668 335 aa23■■□□□ 1.27
FOXN3-209ENST00000555353 RSPH10BP0C881 870 aa23■■□□□ 1.27
FOXN3-209ENST00000555353 PTGDRQ13258 359 aa23■■□□□ 1.27
FOXN3-209ENST00000555353 TMEM266Q2M3C6 531 aa23■■□□□ 1.27
FOXN3-209ENST00000555353 HABP4Q5JVS0 413 aaKnown RBP23■■□□□ 1.27
FOXN3-209ENST00000555353 C9orf50Q5SZB4 431 aa23■■□□□ 1.27
FOXN3-209ENST00000555353 ZBTB10Q96DT7 871 aa23■■□□□ 1.27
FOXN3-209ENST00000555353 BUD13Q9BRD0 619 aaKnown RBP eCLIP23■■□□□ 1.272e-6■■■□□ 18.6
FOXN3-209ENST00000555353 FAM49AQ9H0Q0 323 aaPredicted RBP23■■□□□ 1.27
FOXN3-209ENST00000555353 ZBTB42B2RXF5 422 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 LAD1O00515 517 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 TECP42680 631 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 CYP4A11Q02928 519 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 ZNF365Q70YC5 407 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 C16orf59Q7L2K0 433 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 DNAJB3Q8WWF6 145 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 LXNQ9BS40 222 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 FTOQ9C0B1 505 aaKnown RBP eCLIP22.99■■□□□ 1.276e-7■■■■■ 30.4
FOXN3-209ENST00000555353 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.99■■□□□ 1.27
FOXN3-209ENST00000555353 RGL1Q9NZL6 768 aa22.99■■□□□ 1.27
FOXN3-209ENST00000555353 TET1Q8NFU7 2136 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms