RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 AAASQ9NRG9 546 aa11.16□□□□□ -0.62
SCFD1-215ENST00000555259 RTEL1Q9NZ71 1219 aa11.16□□□□□ -0.62
SCFD1-215ENST00000555259 LRFN2Q9ULH4 789 aa11.16□□□□□ -0.62
SCFD1-215ENST00000555259 PADI3Q9ULW8 664 aa11.16□□□□□ -0.62
SCFD1-215ENST00000555259 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
SCFD1-215ENST00000555259 FRMPD4Q14CM0 1322 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 MARK3P27448 753 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-215ENST00000555259 NT5C2P49902 561 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 IER5Q5VY09 327 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 PLPP4Q5VZY2 271 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 LLGL2Q6P1M3 1020 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 DGLUCYQ7Z3D6 616 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 THNSL1Q8IYQ7 743 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 ZBTB10Q96DT7 871 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 SENP7Q9BQF6 1050 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 SALL3Q9BXA9 1300 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 FAM49AQ9H0Q0 323 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-215ENST00000555259 POMKQ9H5K3 350 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 TMEM260Q9NX78 707 aa11.15□□□□□ -0.62
SCFD1-215ENST00000555259 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-215ENST00000555259 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 KLRF2D3W0D1 207 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 KRT37O76014 449 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 RPLP2P05387 115 aaKnown RBP11.14□□□□□ -0.63
SCFD1-215ENST00000555259 ASGR2P07307 311 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-215ENST00000555259 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 PAK2Q13177 524 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 CWF19L1Q69YN2 538 aaKnown RBP11.14□□□□□ -0.63
SCFD1-215ENST00000555259 HOMER1Q86YM7 354 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 NECTIN4Q96NY8 510 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 TMX1Q9H3N1 280 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 ERAP1Q9NZ08 941 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 HCSTQ9UBK5 93 aa11.14□□□□□ -0.63
SCFD1-215ENST00000555259 CEP250Q9BV73 2442 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 HIDE1A8MVS5 230 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 B4E1Z4 1266 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 ZNF213O14771 459 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 SARSP49591 514 aaKnown RBP11.13□□□□□ -0.63
SCFD1-215ENST00000555259 IGBP1P78318 339 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 TMEM62Q0P6H9 643 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 CES5AQ6NT32 575 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 COLGALT1Q8NBJ5 622 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 FLCNQ8NFG4 579 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 TCF25Q9BQ70 676 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 ADAM7Q9H2U9 754 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 TYW1Q9NV66 732 aaKnown RBP11.13□□□□□ -0.63
SCFD1-215ENST00000555259 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 LZTS1Q9Y250 596 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 PCDHB7Q9Y5E2 793 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 TRPV2Q9Y5S1 764 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 CFAP47Q6ZTR5 3102 aa11.13□□□□□ -0.63
SCFD1-215ENST00000555259 FNDC1Q4ZHG4 1894 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-215ENST00000555259 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 M0QZ92 97 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 PLCB3Q01970 1234 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 ITIH3Q06033 890 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 TRAF1Q13077 416 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 NMIQ13287 307 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-215ENST00000555259 ANGPT1Q15389 498 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 TMEM266Q2M3C6 531 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 CCDC105Q8IYK2 499 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 GIMAP8Q8ND71 665 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-215ENST00000555259 MRPS27Q92552 414 aaKnown RBP11.12□□□□□ -0.63
SCFD1-215ENST00000555259 CASP10Q92851 521 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 GLG1Q92896 1179 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 NGRNQ9NPE2 291 aaKnown RBP11.12□□□□□ -0.63
SCFD1-215ENST00000555259 ENTPD7Q9NQZ7 604 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 MAD2L2Q9UI95 211 aa11.12□□□□□ -0.63
SCFD1-215ENST00000555259 GSTTP1A0A1W2PQM5 241 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-215ENST00000555259 PI15O43692 258 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 MGEA5O60502 916 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 ARP10275 920 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 AOC1P19801 751 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 NFX1Q12986 1120 aaKnown RBP11.11□□□□□ -0.63
SCFD1-215ENST00000555259 IFIT1BQ5T764 474 aaKnown RBP11.11□□□□□ -0.63
SCFD1-215ENST00000555259 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 KIAA2013Q8IYS2 634 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 ZDHHC14Q8IZN3 488 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 TDRD5Q8NAT2 981 aaKnown RBP11.11□□□□□ -0.63
SCFD1-215ENST00000555259 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 PIGSQ96S52 555 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 CELF4Q9BZC1 486 aaKnown RBP11.11□□□□□ -0.63
SCFD1-215ENST00000555259 CWH43Q9H720 699 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 LIMD1Q9UGP4 676 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 PUF60Q9UHX1 559 aaKnown RBP11.11□□□□□ -0.63
SCFD1-215ENST00000555259 HCFC2Q9Y5Z7 792 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 ACACBO00763 2458 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 ATP9AO75110 1047 aa11.11□□□□□ -0.63
SCFD1-215ENST00000555259 LMNAP02545 664 aaKnown RBP11.11□□□□□ -0.63
SCFD1-215ENST00000555259 INSRRP14616 1297 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms