RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NCAM1P13591 858 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 SRSF3P84103 164 aaKnown RBP7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 INAVAQ3KP66 663 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 CD276Q5ZPR3 534 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 TIGD7Q6NT04 549 aaPredicted RBP7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 ESPNLQ6ZVH7 1005 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 ZNF605Q86T29 641 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 ERCC4Q92889 916 aaPredicted RBP7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 ACAP3Q96P50 834 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 PCDH18Q9HCL0 1135 aa7.25□□□□□ -1.25
CKS1BP1-201ENST00000555221 GOLGA6L22H0YM25 854 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 PEX10O60683 326 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 MYBL2P10244 700 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 PTGS1P23219 599 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 IARSP41252 1262 aaKnown RBP7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 STAT5AP42229 794 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 SCAND1P57086 179 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 PTPN21Q16825 1174 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 TTC38Q5R3I4 469 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 RTN4RL1Q86UN2 441 aaPredicted RBP7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 CILP2Q8IUL8 1156 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 AMOTL1Q8IY63 956 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 LMBR1Q8WVP7 490 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 FOXRED1Q96CU9 486 aaPredicted RBP7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 SLC13A1Q9BZW2 595 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 MS4A5Q9H3V2 200 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 AASDHPPTQ9NRN7 309 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 SIRT5Q9NXA8 310 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 FAM53CQ9NYF3 392 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 BTBD7Q9P203 1132 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 TNKSO95271 1327 aa7.24□□□□□ -1.25
CKS1BP1-201ENST00000555221 PRAMEF22A3QJZ6 481 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 TMEM253P0C7T8 217 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 CCND1P24385 295 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 KRT85P78386 507 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 ROM1Q03395 351 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 CACNB2Q08289 660 aaPredicted RBP7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 PIN1Q13526 163 aaPredicted RBP7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 NFE2Q16621 373 aaPredicted RBP7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 CR1LQ2VPA4 569 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 HSP90AB2PQ58FF8 381 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 CCDC181Q5TID7 509 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 PRAMEF18Q5VWM3 479 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 VASNQ6EMK4 673 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 CD300LDQ6UXZ3 194 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 CXorf67Q86X51 503 aaPredicted RBP7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 FMNL3Q8IVF7 1028 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 CALML6Q8TD86 181 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 LIN37Q96GY3 246 aaPredicted RBP7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 FUBP3Q96I24 572 aaKnown RBP eCLIP7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 ZNF496Q96IT1 587 aaPredicted RBP7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 TUBGCP5Q96RT8 1024 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 FOXB1Q99853 325 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 WNT8AQ9H1J5 351 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 EPB41L4BQ9H329 900 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 MKS1Q9NXB0 559 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 MRFAP1Q9Y605 127 aa7.23□□□□□ -1.25
CKS1BP1-201ENST00000555221 ZNF503-AS2A6NEH8 195 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 TRIM75PA6NK02 468 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 ZNF839A8K0R7 811 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 MT-CO1P00395 513 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 RBP3P10745 1247 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 PFKLP17858 780 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 FBLN1P23142 703 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 RAB27AP51159 221 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 ALDH6A1Q02252 535 aaKnown RBP7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 PDCD1Q15116 288 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 PPP2R5AQ15172 486 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 PGM2L1Q6PCE3 622 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 C1orf162Q8NEQ5 155 aaPredicted RBP7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 IGDCC4Q8TDY8 1250 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 HOOK2Q96ED9 719 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 MAML3Q96JK9 1138 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 CAMKK2Q96RR4 588 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 TMEM209Q96SK2 561 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 DCP1AQ9NPI6 582 aaPredicted RBP7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 INCENPQ9NQS7 918 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 IRS2Q9Y4H2 1338 aa7.22□□□□□ -1.25
CKS1BP1-201ENST00000555221 AKAP10O43572 662 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 SNUPNO95149 360 aaKnown RBP7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 PRLP01236 227 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 CYP2C8P10632 490 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 IRAK1P51617 712 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 PFKPQ01813 784 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 SLC6A3Q01959 620 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 FSCN1Q16658 493 aaKnown RBP7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 TMEM132EQ6IEE7 984 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 TTLL7Q6ZT98 887 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 RAVER1Q8IY67 606 aaKnown RBP7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 FERMT2Q96AC1 680 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 FAXDC2Q96IV6 333 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 ORAI2Q96SN7 254 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 POFUT1Q9H488 388 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 NSUN3Q9H649 340 aaKnown RBP7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 SLC39A2Q9NP94 309 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 UCKL1Q9NWZ5 548 aa7.21□□□□□ -1.26
CKS1BP1-201ENST00000555221 ST20-MTHFSA0A0A6YYL1 179 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 TEX51A0A1B0GUA7 166 aa7.2□□□□□ -1.26
CKS1BP1-201ENST00000555221 LCHNA4D1U4 455 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms