RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ARHGEF3Q9NR81 526 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 A0A1W2PQJ5 194 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 KLRK1P26718 216 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 PCK1P35558 622 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 KIF11P52732 1056 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 INF2Q27J81 1249 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 KRT71Q3SY84 523 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 FBXO33Q7Z6M2 555 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 DHTKD1Q96HY7 919 aaPredicted RBP17.04■□□□□ 0.32
SYNE3-203ENST00000554873 ELAC2Q9BQ52 826 aaKnown RBP17.04■□□□□ 0.32
SYNE3-203ENST00000554873 ATP8A2Q9NTI2 1148 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 PCMTD2Q9NV79 361 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 TAF1P21675 1872 aa17.04■□□□□ 0.32
SYNE3-203ENST00000554873 A0A1B0GUL6 1792 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 PJA2O43164 708 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 HIP1RO75146 1068 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 MYL1P05976 194 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 MMEP08473 750 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 PLEKP08567 350 aaPredicted RBP17.03■□□□□ 0.32
SYNE3-203ENST00000554873 ERVK-9P63128 1117 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 ANKRD40Q6AI12 368 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 CREB3O43889 395 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 ATP6V1C1P21283 382 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 ABCD1P33897 745 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 GNAQP50148 359 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 ITPK1Q13572 414 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 SLC35G1Q2M3R5 365 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 GALNTL6Q49A17 601 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 FIGNQ5HY92 759 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 LRRC34Q8IZ02 419 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 RNF10Q8N5U6 811 aaKnown RBP17.03■□□□□ 0.32
SYNE3-203ENST00000554873 GBP7Q8N8V2 638 aaPredicted RBP17.03■□□□□ 0.32
SYNE3-203ENST00000554873 FBXL5Q9UKA1 691 aa17.03■□□□□ 0.32
SYNE3-203ENST00000554873 E7ENQ6 273 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 SART1O43290 800 aaKnown RBP17.02■□□□□ 0.32
SYNE3-203ENST00000554873 ADAMTS2O95450 1211 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 HNRNPH3P31942 346 aaKnown RBP17.02■□□□□ 0.32
SYNE3-203ENST00000554873 COPS2P61201 443 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 TFAP4Q01664 338 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 MAEAQ7L5Y9 396 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 PCMTD1Q96MG8 357 aaPredicted RBP17.02■□□□□ 0.32
SYNE3-203ENST00000554873 NSRP1Q9H0G5 558 aaKnown RBP17.02■□□□□ 0.32
SYNE3-203ENST00000554873 STK38LQ9Y2H1 464 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 PHLPP1O60346 1717 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.32
SYNE3-203ENST00000554873 GNAZP19086 355 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 TPP2P29144 1249 aaPredicted RBP17.02■□□□□ 0.32
SYNE3-203ENST00000554873 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 P2RX5Q93086 422 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 SALL4Q9UJQ4 1053 aa17.02■□□□□ 0.32
SYNE3-203ENST00000554873 USP17L8P0C7I0 530 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 CHN1P15882 459 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 SP100P23497 879 aaPredicted RBP17.02■□□□□ 0.31
SYNE3-203ENST00000554873 CCNE1P24864 410 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 PRDX5P30044 214 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 GBP1P32455 592 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 KLC1Q07866 573 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 STK4Q13043 487 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 FBF1Q8TES7 1133 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 MAIP1Q8WWC4 291 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 ATXN2LQ8WWM7 1075 aaKnown RBP17.02■□□□□ 0.31
SYNE3-203ENST00000554873 CELF1Q92879 486 aaKnown RBP17.02■□□□□ 0.31
SYNE3-203ENST00000554873 TRAPPC9Q96Q05 1148 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.02■□□□□ 0.31
SYNE3-203ENST00000554873 ARHGAP20Q9P2F6 1191 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 ARPP21Q9UBL0 812 aaPredicted RBP17.02■□□□□ 0.31
SYNE3-203ENST00000554873 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.31
SYNE3-203ENST00000554873 LOC102724428A0A0B4J2F2 783 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 MAGEA1P43355 309 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 POLE2P56282 527 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 SIK1P57059 783 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 BNIP1Q12981 228 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 SF3B3Q15393 1217 aaKnown RBP17.01■□□□□ 0.31
SYNE3-203ENST00000554873 MIIPQ5JXC2 388 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 TMEM154Q6P9G4 183 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 IQCDQ96DY2 449 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 MTMR8Q96EF0 704 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 PBKQ96KB5 322 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 CNOT6LQ96LI5 555 aaKnown RBP17.01■□□□□ 0.31
SYNE3-203ENST00000554873 VCXQ9H320 206 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 MCM9Q9NXL9 1143 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 AKR1B10O60218 316 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 PDHA1P08559 390 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 PLCG1P19174 1290 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 PDE4DQ08499 809 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 SF3A3Q12874 501 aaKnown RBP eCLIP17.01■□□□□ 0.316e-9■■■■■ 59.3
SYNE3-203ENST00000554873 DGKHQ86XP1 1220 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 KIF2BQ8N4N8 673 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 INPP4AQ96PE3 977 aaPredicted RBP17.01■□□□□ 0.31
SYNE3-203ENST00000554873 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
SYNE3-203ENST00000554873 COL22A1Q8NFW1 1626 aaPredicted RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 TULP1O00294 542 aaPredicted RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 CYTH3O43739 400 aa17■□□□□ 0.31
SYNE3-203ENST00000554873 EIF4A3P38919 411 aaKnown RBP17■□□□□ 0.31
SYNE3-203ENST00000554873 MTIF2P46199 727 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms