RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 RPAINQ86UA6 219 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 RPUSD2Q8IZ73 545 aaKnown RBP14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 TRAPPC12Q8WVT3 735 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 BBXQ8WY36 941 aaPredicted RBP14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 ZBTB10Q96DT7 871 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 TMEM60Q9H2L4 133 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 TUBE1Q9UJT0 475 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 PCDHA12Q9UN75 941 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 IGSF9BQ9UPX0 1349 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 LTBP2Q14767 1821 aa14.55□□□□□ -0.08
MTHFD1-208ENST00000554739 ZBTB42B2RXF5 422 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 CAND2O75155 1236 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 STBD1O95210 358 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 MCM7P33993 719 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 ORC2Q13416 577 aaPredicted RBP14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 MBTPS1Q14703 1052 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 ZNF174Q15697 407 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 LRIT3Q3SXY7 679 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 ZNF484Q5JVG2 852 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 MCTP1Q6DN14 999 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 TAF2Q6P1X5 1199 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 C4orf32Q8N8J7 132 aa14.54□□□□□ -0.08
MTHFD1-208ENST00000554739 RSPH10B2B2RC85 870 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 FGBP02675 491 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 RSPH10BP0C881 870 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 KLRC1P26715 233 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 TXKP42681 527 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 EPHA7Q15375 998 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 RASIP1Q5U651 963 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 PSRC1Q6PGN9 363 aaPredicted RBP14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 MTHFD1LQ6UB35 978 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 DEFB128Q7Z7B8 93 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 TTC12Q9H892 705 aaPredicted RBP14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 NRBP2Q9NSY0 501 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 NOL7Q9UMY1 257 aaKnown RBP14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 PCDHA2Q9Y5H9 948 aa14.53□□□□□ -0.08
MTHFD1-208ENST00000554739 COL1A2P08123 1366 aa14.52□□□□□ -0.08
MTHFD1-208ENST00000554739 NBNO60934 754 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 PARNO95453 639 aaKnown RBP14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 CXCL10P02778 98 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 OATP04181 439 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 PFKMP08237 780 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 PDCP20941 246 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 PRKCEQ02156 737 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 NBR1Q14596 966 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 FAM26DQ5JW98 314 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 TRMT1LQ7Z2T5 733 aaKnown RBP14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 BANK1Q8NDB2 785 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 DNAJB3Q8WWF6 145 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 HERVK_113Q902F9 699 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 FAM167AQ96KS9 214 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 PCDHB6Q9Y5E3 794 aa14.52□□□□□ -0.09
MTHFD1-208ENST00000554739 SMIM35A0A1B0GVV1 85 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 RBAK-RBAKDNI3L0D1 243 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 SOX1O00570 391 aaPredicted RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 CHRNA1P02708 482 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 P4HBP07237 508 aaKnown RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 CTSHP09668 335 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 SYT1P21579 422 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 QARSP47897 775 aaKnown RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 FXR1P51114 621 aaKnown RBP eCLIP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 PSMC5P62195 406 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 TARBP2Q15633 366 aaKnown RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 RILPL1Q5EBL4 403 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 XKR3Q5GH77 459 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 NCAPH2Q6IBW4 605 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 OTOP2Q7RTS6 562 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 RNPC3Q96LT9 517 aaKnown RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 HSD17B14Q9BPX1 270 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 NIFKQ9BYG3 293 aaKnown RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 OSBPL7Q9BZF2 842 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 FAM49AQ9H0Q0 323 aaPredicted RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 RGL1Q9NZL6 768 aa14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 CXXC1Q9P0U4 656 aaPredicted RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 WRAP73Q9P2S5 460 aaPredicted RBP14.51□□□□□ -0.09
MTHFD1-208ENST00000554739 DDX11L8A8MPP1 907 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 SLITRK3O94933 977 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 C22orf31O95567 290 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 RPLP2P05387 115 aaKnown RBP14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 OR52Z1P0C646 297 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 PTGDRQ13258 359 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 ANO5Q75V66 913 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 RSPH3Q86UC2 560 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 HSCBQ8IWL3 235 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 KIAA0319LQ8IZA0 1049 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 NME8Q8N427 588 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 DYDC2Q96IM9 177 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 CEP89Q96ST8 783 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 FTOQ9C0B1 505 aaKnown RBP eCLIP14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 CEP131Q9UPN4 1083 aa14.5□□□□□ -0.09
MTHFD1-208ENST00000554739 TMEM150BA6NC51 233 aa14.49□□□□□ -0.09
MTHFD1-208ENST00000554739 MAGEB2O15479 319 aa14.49□□□□□ -0.09
MTHFD1-208ENST00000554739 DKC1O60832 514 aaKnown RBP eCLIP14.49□□□□□ -0.09
MTHFD1-208ENST00000554739 TECP42680 631 aa14.49□□□□□ -0.09
MTHFD1-208ENST00000554739 MGAT3Q09327 533 aa14.49□□□□□ -0.09
MTHFD1-208ENST00000554739 TCTN1Q2MV58 587 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms