RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CTNNAL1Q9UBT7 734 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 RPL26L1Q9UNX3 145 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 PLXNB3Q9ULL4 1909 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 NUP210LQ5VU65 1888 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 MEIS1O00470 390 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ENDOD1O94919 500 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 GZMAP12544 262 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CHRNB2P17787 502 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 PON1P27169 355 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CTNNA1P35221 906 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 MAGEA9P43362 315 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ADKP55263 362 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 IRX5P78411 483 aaPredicted RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 TRIM29Q14134 588 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 PLS1Q14651 629 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 RRP1BQ14684 758 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 PPP2R5EQ16537 467 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 DTHD1Q6ZMT9 781 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 MMS22LQ6ZRQ5 1243 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 MICU3Q86XE3 530 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ADGRF4Q8IZF3 695 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SLC17A8Q8NDX2 589 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SPATA4Q8NEY3 305 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 SPIRE2Q8WWL2 714 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 ART4Q93070 314 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 CEP95Q96GE4 821 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 RBM17Q96I25 401 aaKnown RBP3.81□□□□□ -1.8
SEC23A-207ENST00000554615 RUNDC3BQ96NL0 473 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 RIT2Q99578 217 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 NUDT12Q9BQG2 462 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 FGFBP2Q9BYJ0 223 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 LRRC19Q9H756 370 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 BRMS1Q9HCU9 246 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 VPS18Q9P253 973 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 PNMA2Q9UL42 364 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 HYOU1Q9Y4L1 999 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 COL4A3BPQ9Y5P4 624 aa3.81□□□□□ -1.8
SEC23A-207ENST00000554615 DOCK4Q8N1I0 1966 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 PTPRJQ12913 1337 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 MROH7Q68CQ1 1323 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 PES1O00541 588 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 FGFR1OPO95684 399 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CYP1A1P04798 512 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 IVLP07476 585 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 USP17L8P0C7I0 530 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 NPR1P16066 1061 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 PROZP22891 400 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 EDNRBP24530 442 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 OAS2P29728 719 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 GBP1P32455 592 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SKIV2L2P42285 1042 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 GPC3P51654 580 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ARSEP51690 589 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 AMPD3Q01432 767 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 PPFIA1Q13136 1202 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 XRCC4Q13426 336 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 EFHC2Q5JST6 749 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SYDE1Q6ZW31 735 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 TRMT44Q8IYL2 757 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ACRBPQ8NEB7 543 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 TPCN2Q8NHX9 752 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 RTP4Q96DX8 246 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 GJD4Q96KN9 370 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ANKRD27Q96NW4 1050 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 MYL10Q9BUA6 226 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC113Q9H0I3 377 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 TMX2Q9Y320 296 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SAR1BQ9Y6B6 198 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 NUP210Q8TEM1 1887 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ADGRA3Q8IWK6 1321 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SHROOM3Q8TF72 1996 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 FAM187AA6NFU0 413 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 NUTM2BA6NNL0 878 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 NUTM2EB1AL46 878 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 EML1O00423 815 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ASAP2O43150 1006 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 KCNQ2O43526 872 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CCNB1P14635 433 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 KIF11P52732 1056 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 JAG1P78504 1218 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SH3D19Q5HYK7 790 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CC2D2BQ6DHV5 1058 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CDC42EP5Q6NZY7 148 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF449Q6P9G9 518 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 FAM71AQ8IYT1 594 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 TSEN2Q8NCE0 465 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 TMC2Q8TDI7 906 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CUL5Q93034 780 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 TEPSINQ96N21 525 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 MOV10L1Q9BXT6 1211 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 NFKBIZQ9BYH8 718 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CARD9Q9H257 536 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 VRTNQ9H8Y1 702 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 C6orf50Q9HD87 102 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ARGLU1Q9NWB6 273 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 HERC5Q9UII4 1024 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 EFR3BQ9Y2G0 817 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CITO14578 2027 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 PTPRSQ13332 1948 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms