RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 DEXIO95424 95 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 CTDNEP1O95476 244 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 FAM86B2P0C5J1 330 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 MYOGP15173 224 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 WDR5P61964 334 aaKnown RBP14.05□□□□□ -0.16
SHMT2-214ENST00000554604 SETQ01105 290 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-214ENST00000554604 ITGB3BPQ13352 177 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-214ENST00000554604 MBTPS1Q14703 1052 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 GPNMBQ14956 572 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 GRIK4Q16099 956 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 HERC6Q8IVU3 1022 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 FAM184AQ8NB25 1140 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-214ENST00000554604 UIMC1Q96RL1 719 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 ZBED2Q9BTP6 218 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 TCEAL9Q9UHQ7 104 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 TUBE1Q9UJT0 475 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 UNC80Q8N2C7 3258 aa14.05□□□□□ -0.16
SHMT2-214ENST00000554604 TRANK1O15050 2925 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 BACH1O14867 736 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 TLL1O43897 1013 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 DTNBO60941 627 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 CA3P07451 260 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 STAT5BP51692 787 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 UBE2HP62256 183 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 IGBP1P78318 339 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 KRT85P78386 507 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 ADAM17P78536 824 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 ZSCAN23Q3MJ62 389 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 PRR16Q569H4 304 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 TAF2Q6P1X5 1199 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 TRAF7Q6Q0C0 670 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 RSPH3Q86UC2 560 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 CRYGNQ8WXF5 182 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 ZNF577Q9BSK1 485 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 ZSCAN16Q9H4T2 348 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-214ENST00000554604 GRPEL1Q9HAV7 217 aa14.04□□□□□ -0.16
SHMT2-214ENST00000554604 IGLV3-22A0A075B6J6 115 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 RRN3P2A6NIE6 340 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 INSRRP14616 1297 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 DNM1Q05193 864 aaKnown RBP14.03□□□□□ -0.16
SHMT2-214ENST00000554604 RESTQ13127 1097 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 FOXD4L6Q3SYB3 417 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-214ENST00000554604 FAM160B1Q5W0V3 765 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 FOXD4L3Q6VB84 417 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-214ENST00000554604 PLPPR4Q7Z2D5 763 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 GAS2L3Q86XJ1 694 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 DBF4BQ8NFT6 615 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 SEPT8Q92599 483 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 PCYT2Q99447 389 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 TBC1D22BQ9NU19 505 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 TMEM63CQ9P1W3 806 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 PCDHA4Q9UN74 947 aa14.03□□□□□ -0.16
SHMT2-214ENST00000554604 PRRC2BQ5JSZ5 2229 aaKnown RBP14.03□□□□□ -0.16
SHMT2-214ENST00000554604 SIP14410 1827 aa14.02□□□□□ -0.16
SHMT2-214ENST00000554604 POTEB3A0JP26 581 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 H3BQV1 296 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 GADD45BO75293 160 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-214ENST00000554604 ATG7O95352 703 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 CCNE2O96020 404 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 RPLP2P05387 115 aaKnown RBP14.02□□□□□ -0.17
SHMT2-214ENST00000554604 XRCC6P12956 609 aaKnown RBP eCLIP14.02□□□□□ -0.17
SHMT2-214ENST00000554604 XBP1P17861 261 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 IGFBP4P22692 258 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 SLC26A2P50443 739 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 USP11P51784 963 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 DEFB103AP81534 67 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 PLEKHG4Q58EX7 1191 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 MIS18BP1Q6P0N0 1132 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 POTEBQ6S5H4 581 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 RUFY4Q6ZNE9 571 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 BLIDQ8IZY5 108 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 GDPD2Q9HCC8 539 aa14.02□□□□□ -0.17
SHMT2-214ENST00000554604 MBLAC1A4D2B0 266 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-214ENST00000554604 DHX15O43143 795 aaKnown RBP14.01□□□□□ -0.17
SHMT2-214ENST00000554604 AMHP03971 560 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 CIITAP33076 1130 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 PLCB4Q15147 1175 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 TCTN1Q2MV58 587 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 MARCH8Q5T0T0 291 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-214ENST00000554604 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 PDXDC2PQ6P474 469 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 ABHD15Q6UXT9 468 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 TMCO2Q7Z6W1 182 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-214ENST00000554604 RPAINQ86UA6 219 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 FAM177A1Q8N128 213 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-214ENST00000554604 TBCKQ8TEA7 893 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 DNAJB3Q8WWF6 145 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-214ENST00000554604 FAM49AQ9H0Q0 323 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-214ENST00000554604 ZNF302Q9NR11 478 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 SAMM50Q9Y512 469 aa14.01□□□□□ -0.17
SHMT2-214ENST00000554604 M0QZ92 97 aa14□□□□□ -0.17
SHMT2-214ENST00000554604 GJB5O95377 273 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms