RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 EPC2Q52LR7 807 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 NAXEQ8NCW5 288 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CCT7Q99832 543 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.55□□□□□ -1.845e-6■■■□□ 16.3
SYNE2-212ENST00000554584 SENP6Q9GZR1 1112 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ADGRA2Q96PE1 1338 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 DOCK7Q96N67 2140 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PSMA7O14818 248 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 NCF2P19878 526 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 LMNB1P20700 586 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 AK2P54819 239 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 COBLL1Q53SF7 1204 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MAML3Q96JK9 1138 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 BRD8Q9H0E9 1235 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CNGB3Q9NQW8 809 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ING3Q9NXR8 418 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 EIF4G3O43432 1585 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PLCH2O75038 1416 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 GAS7O60861 476 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PRAMEF19Q5SWL8 479 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 KIAA1524Q8TCG1 905 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MRFAP1L1Q96HT8 127 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CHORDC1Q9UHD1 332 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 LUC7L3O95232 432 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MAP2K2P36507 400 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ADKP55263 362 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 TTC38Q5R3I4 469 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM48Q8IWZ4 208 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 HS6ST3Q8IZP7 471 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ELMOD1Q8N336 334 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CIDEBQ9UHD4 219 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CAPN11Q9UMQ6 739 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MAP3K6O95382 1288 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 OSBPP22059 807 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 FEN1P39748 380 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 TCP11X2Q5H9J9 407 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PPP6R3Q5H9R7 873 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 LMBR1Q8WVP7 490 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 EYA1Q99502 592 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SPTA1P02549 2419 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 RASSF10A6NK89 507 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SYDE2Q5VT97 1194 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 TYW1BQ6NUM6 668 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 STAG2Q8N3U4 1231 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PIGOQ8TEQ8 1089 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ESR2Q92731 530 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 NOX5Q96PH1 765 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 EGFL8Q99944 293 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 EXOSC4Q9NPD3 245 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 BSDC1Q9NW68 430 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MYH7P12883 1935 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SGK1O00141 431 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 HEXIM1O94992 359 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 LMNAP02545 664 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PEX5P50542 639 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 NME5P56597 212 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 NOSTRINQ8IVI9 506 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SYTL5Q8TDW5 730 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SMYD3Q9H7B4 428 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 FAM207AQ9NSI2 230 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 DDX28Q9NUL7 540 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 WARS2Q9UGM6 360 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SHOC2Q9UQ13 582 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SRGAP1Q7Z6B7 1085 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 RBM23Q86U06 439 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 RNF10Q8N5U6 811 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 JADE3Q92613 823 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 UTP6Q9NYH9 597 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PCSK1NQ9UHG2 260 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 KITP10721 976 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ARF4P18085 180 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 GALK1P51570 392 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ABCB5Q2M3G0 1257 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ERCC6LQ2NKX8 1250 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 GSPT2Q8IYD1 628 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MYL4P12829 197 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PHKA1P46020 1223 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PCSK7Q16549 785 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SV2BQ7L1I2 683 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 MAML1Q92585 1016 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 KCNS3Q9BQ31 491 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CD109Q6YHK3 1445 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF608Q9ULD9 1512 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 SPAM1P38567 509 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PPIP5K1Q6PFW1 1433 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ACSF2Q96CM8 615 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 CALN1Q9BXU9 219 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 DBNLQ9UJU6 430 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 RPSAP08865 295 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 DPEP1P16444 411 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 EEF1DP29692 281 aaKnown RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 RNF44Q7L0R7 432 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF496Q96IT1 587 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-212ENST00000554584 TTC14Q96N46 770 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 NCOA2Q15596 1464 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 ITIH6Q6UXX5 1313 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 AOC2O75106 756 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 GYS1P13807 737 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 GSSP48637 474 aa3.55□□□□□ -1.84
SYNE2-212ENST00000554584 PRPSAP1Q14558 356 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms