RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 RPN1P04843 607 aaKnown RBP11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 CNGA1P29973 690 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 SLC26A2P50443 739 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 STAT5BP51692 787 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 NLRP12P59046 1061 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 PSMC6P62333 389 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 TYRO3Q06418 890 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 DPYDQ12882 1025 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 UTP14CQ5TAP6 766 aaKnown RBP11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 KCNK18Q7Z418 384 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 GPBP1Q86WP2 473 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 CCDC65Q8IXS2 484 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 FAM167AQ96KS9 214 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 GPR20Q99678 358 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 TRIM9Q9C026 710 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 KATNBL1Q9H079 304 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 SMARCAD1Q9H4L7 1026 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 BCAS3Q9H6U6 928 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 SPC25Q9HBM1 224 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 EXOC1Q9NV70 894 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 Q9Y3F1 56 aa11.65□□□□□ -0.54
TMEM55B-205ENST00000554028 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 BIN1O00499 593 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 DYNC1LI2O43237 492 aaPredicted RBP11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 ADCY3O60266 1144 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 PPFIA4O75335 1185 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 ZNF865P0CJ78 1059 aaPredicted RBP11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 AKR1A1P14550 325 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 IDEP14735 1019 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 SMPD1P17405 629 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 SARSP49591 514 aaKnown RBP11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 SLC12A3P55017 1021 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 ARHGAP1Q07960 439 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 CUL4BQ13620 913 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 GSE1Q14687 1217 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 KCNB1Q14721 858 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 XKR9Q5GH70 373 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 NT5DC1Q5TFE4 455 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 CNNM4Q6P4Q7 775 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 DYMQ7RTS9 669 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 PLPPR4Q7Z2D5 763 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 PPTC7Q8NI37 304 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 PXYLP1Q8TE99 480 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 AFAP1L1Q8TED9 768 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 DDX12PQ92771 950 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 ERCC4Q92889 916 aaPredicted RBP11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 COPS5Q92905 334 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 TIPINQ9BVW5 301 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 WBP1LQ9NX94 342 aa11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 MAFBQ9Y5Q3 323 aaPredicted RBP11.64□□□□□ -0.55
TMEM55B-205ENST00000554028 A0A087WWV3 80 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 IGKV6D-21A0A0A0MT36 114 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 MYMKA6NI61 221 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 TBCAO75347 108 aaKnown RBP11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 HMGCRP04035 888 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 CYP11B2P19099 503 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 PPP1R2P41236 205 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 CPT1AP50416 773 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 PSMD2Q13200 908 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 STIM1Q13586 685 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 DGKDQ16760 1214 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 UNC13DQ70J99 1090 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 TRMT1LQ7Z2T5 733 aaKnown RBP11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 CCDC60Q8IWA6 550 aaPredicted RBP11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 EXOC8Q8IYI6 725 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 MLKLQ8NB16 471 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 SLAIN1Q8ND83 568 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 SPATA20Q8TB22 786 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 AFG1LQ8WV93 481 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 TRIB2Q92519 343 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 MTRQ99707 1265 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 ZHX3Q9H4I2 956 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 PANK4Q9NVE7 773 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 MAN1B1Q9UKM7 699 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 ZNF215Q9UL58 517 aaPredicted RBP11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 PPME1Q9Y570 386 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 COL4A3BPQ9Y5P4 624 aa11.63□□□□□ -0.55
TMEM55B-205ENST00000554028 EMSYQ7Z589 1322 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 GOLGA6L3A6NEY3 463 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 ZEB2O60315 1214 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 KPNA6O60684 536 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 LGR5O75473 907 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 FAM13AO94988 1023 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 KIF20AO95235 890 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 OATP04181 439 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 CASP1P29466 404 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 RARRES1P49788 294 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 PRKCEQ02156 737 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 UGCGQ16739 394 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 KMT5BQ4FZB7 885 aa11.62□□□□□ -0.55
TMEM55B-205ENST00000554028 CT47A1Q5JQC4 288 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms