RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 COG2Q14746 738 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 E2F5Q15329 346 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 USH1GQ495M9 461 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 TMEM119Q4V9L6 283 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 ZNF662Q6ZS27 426 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 CPNE8Q86YQ8 564 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 CCDC26Q8TAB7 109 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 OSGEPQ9NPF4 335 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
SPTB-206ENST00000553938 UBXN2AP68543 259 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 KCNH2Q12809 1159 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 FIGNQ5HY92 759 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 PALB2Q86YC2 1186 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 NOC3LQ8WTT2 800 aaKnown RBP13.25□□□□□ -0.29
SPTB-206ENST00000553938 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 IGSF9BQ9UPX0 1349 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 PPP1R12BO60237 982 aaPredicted RBP13.25□□□□□ -0.29
SPTB-206ENST00000553938 HOXA13P31271 388 aaPredicted RBP13.25□□□□□ -0.29
SPTB-206ENST00000553938 KLHL30Q0D2K2 578 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 DPY19L2P1Q6NXN4 242 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 FAM196AQ6ZSG2 479 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 ARMC2Q8NEN0 867 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 WDR66Q8TBY9 1149 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 KCTD10Q9H3F6 313 aa13.25□□□□□ -0.29
SPTB-206ENST00000553938 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 RBAK-RBAKDNI3L0D1 243 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 LAD1O00515 517 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 CDK17Q00537 523 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 ADAM9Q13443 819 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 HLTFQ14527 1009 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPTB-206ENST00000553938 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 GANQ9H2C0 597 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 PPANQ9NQ55 473 aaKnown RBP13.24□□□□□ -0.29
SPTB-206ENST00000553938 AMACRQ9UHK6 382 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 PCDHA12Q9UN75 941 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPTB-206ENST00000553938 PLA2G4BP0C869 781 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 CYP11B2P19099 503 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■■■□ 26.3
SPTB-206ENST00000553938 EPHB4P54760 987 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 AMPD3Q01432 767 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 GRAPQ13588 217 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 QPCTQ16769 361 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 TCERG1LQ5VWI1 586 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 MAATS1Q7Z4T9 603 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 GRAPLQ8TC17 118 aaPredicted RBP13.24□□□□□ -0.29
SPTB-206ENST00000553938 MICAL1Q8TDZ2 1067 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 RGL1Q9NZL6 768 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
SPTB-206ENST00000553938 GPR75-ASB3A0A0A6YYF3 556 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 NDUFAB1O14561 156 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 CEP104O60308 925 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 ATP2C2O75185 946 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 AKAP3O75969 853 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 NR2F2P24468 414 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 PPFIA1Q13136 1202 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 CEP85LQ5SZL2 805 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 PRR5LQ6MZQ0 368 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 TRIM59Q8IWR1 403 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 UHMK1Q8TAS1 419 aaKnown RBP13.23□□□□□ -0.29
SPTB-206ENST00000553938 CCDC47Q96A33 483 aaKnown RBP13.23□□□□□ -0.29
SPTB-206ENST00000553938 TRIM51Q9BSJ1 452 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 DPH5Q9H2P9 285 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 DNAJC18Q9H819 358 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 CNOT8Q9UFF9 292 aaKnown RBP13.23□□□□□ -0.29
SPTB-206ENST00000553938 MYL1P05976 194 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 TCP1P17987 556 aaKnown RBP13.23□□□□□ -0.29
SPTB-206ENST00000553938 PAFAH1B1P43034 410 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 PPP4CP60510 307 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
SPTB-206ENST00000553938 SFR1Q86XK3 245 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 PIGOQ8TEQ8 1089 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 FAM84AQ96KN4 292 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 SH3GL3Q99963 347 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 TSGA10Q9BZW7 698 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 MAST2Q6P0Q8 1798 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 ANKRD33BA6NCL7 494 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 FOXO6A8MYZ6 492 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 CHUKO15111 745 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 GRIK3Q13003 919 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 ZNF211Q13398 564 aaPredicted RBP13.23□□□□□ -0.29
SPTB-206ENST00000553938 NAB2Q15742 525 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 PRR16Q569H4 304 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 MEI1Q5TIA1 1274 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 GDF3Q9NR23 364 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 TAS2R14Q9NYV8 317 aa13.23□□□□□ -0.29
SPTB-206ENST00000553938 TISP43B9A030 160 aa13.22□□□□□ -0.29
SPTB-206ENST00000553938 PJA2O43164 708 aa13.22□□□□□ -0.29
SPTB-206ENST00000553938 HSF2BPO75031 334 aa13.22□□□□□ -0.29
SPTB-206ENST00000553938 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
SPTB-206ENST00000553938 LSP1P33241 339 aa13.22□□□□□ -0.29
SPTB-206ENST00000553938 JAG1P78504 1218 aa13.22□□□□□ -0.29
SPTB-206ENST00000553938 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms