RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 CRACR2BQ8N4Y2 399 aaPredicted RBP10.96□□□□□ -0.65
CFAP54-204ENST00000553778 ZNF513Q8N8E2 541 aaPredicted RBP10.96□□□□□ -0.65
CFAP54-204ENST00000553778 RETREG2Q8NC44 543 aa10.96□□□□□ -0.65
CFAP54-204ENST00000553778 MKL1Q969V6 931 aa10.96□□□□□ -0.65
CFAP54-204ENST00000553778 KLRG1Q96E93 195 aa10.96□□□□□ -0.65
CFAP54-204ENST00000553778 EPAS1Q99814 870 aa10.96□□□□□ -0.65
CFAP54-204ENST00000553778 GORASP1Q9BQQ3 440 aa10.96□□□□□ -0.65
CFAP54-204ENST00000553778 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.65
CFAP54-204ENST00000553778 SERTAD1Q9UHV2 236 aa10.96□□□□□ -0.65
CFAP54-204ENST00000553778 HERC5Q9UII4 1024 aaKnown RBP10.96□□□□□ -0.65
CFAP54-204ENST00000553778 GSG1L2A8MUP6 293 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 GCOM1H8Y6P7 765 aaPredicted RBP10.96□□□□□ -0.66
CFAP54-204ENST00000553778 ZNF185O15231 689 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 TACC1O75410 805 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 RNF8O76064 485 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 MYZAPP0CAP1 466 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 KIF5BP33176 963 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 MAP3K10Q02779 954 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 KIF5AQ12840 1032 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 CUL3Q13618 768 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 SETDB1Q15047 1291 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 SLC4A8Q2Y0W8 1093 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 APBB1IPQ7Z5R6 666 aaPredicted RBP10.96□□□□□ -0.66
CFAP54-204ENST00000553778 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 CCDC197Q8NCU1 140 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 AGAP11Q8TF27 550 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 IQCDQ96DY2 449 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 SLC10A4Q96EP9 437 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 WRNIP1Q96S55 665 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 FBXO2Q9UK22 296 aaPredicted RBP10.96□□□□□ -0.66
CFAP54-204ENST00000553778 LUC7L2Q9Y383 392 aaKnown RBP10.96□□□□□ -0.66
CFAP54-204ENST00000553778 PCDHGA4Q9Y5G9 962 aa10.96□□□□□ -0.66
CFAP54-204ENST00000553778 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
CFAP54-204ENST00000553778 LRRD1A4D1F6 860 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 POLR2DO15514 142 aaKnown RBP10.95□□□□□ -0.66
CFAP54-204ENST00000553778 FLOT1O75955 427 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 GNAT1P11488 350 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 DRD4P21917 467 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 ECE1P42892 770 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 ZNF131P52739 623 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 PPP2R2AP63151 447 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 QPCTQ16769 361 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 KRT40Q6A162 431 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 IFNL3Q8IZI9 196 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 RBM41Q96IZ5 413 aaKnown RBP10.95□□□□□ -0.66
CFAP54-204ENST00000553778 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 CEP131Q9UPN4 1083 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 CSADQ9Y600 493 aa10.95□□□□□ -0.66
CFAP54-204ENST00000553778 SSC5DA1L4H1 1573 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 PPP1R3GB7ZBB8 358 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 USP17L12C9JPN9 530 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 USP17L21D6R901 530 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 RNF225M0QZC1 329 aaPredicted RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ZSCAN9O15535 394 aaPredicted RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 SMIM24O75264 130 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 CTCFP49711 727 aaPredicted RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 GRM1Q13255 1194 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 LRRC23Q53EV4 343 aaPredicted RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 HHATQ5VTY9 493 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 WDR59Q6PJI9 974 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 MIPOL1Q8TD10 442 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 PLEKHG4BQ96PX9 1271 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ALG1Q9BT22 464 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ARPP21Q9UBL0 812 aaPredicted RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 SERPINB13Q9UIV8 391 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ZNF112Q9UJU3 913 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 SRPRBQ9Y5M8 271 aaKnown RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 STK36Q9NRP7 1315 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 PAPPA2Q9BXP8 1791 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 KLF18A0A0U1RQI7 1052 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 GOLGA8BA8MQT2 603 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 DIAPH2O60879 1101 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ALDH3A1P30838 453 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 RILPL1Q5EBL4 403 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 TCP11X2Q5H9J9 407 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ANKRD20A2Q5SQ80 823 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ANKRD20A1Q5TYW2 823 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 C12orf60Q5U649 245 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 ANKRD20A3Q5VUR7 823 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 CYP4F22Q6NT55 531 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 CPLX4Q7Z7G2 160 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 SESTD1Q86VW0 696 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 STK11IPQ8N1F8 1099 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 GBP7Q8N8V2 638 aaPredicted RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 CFAP61Q8NHU2 1237 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 RAPGEF5Q92565 580 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 LRRC45Q96CN5 670 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 CHMP6Q96FZ7 201 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 NAF1Q96HR8 494 aaKnown RBP10.94□□□□□ -0.66
CFAP54-204ENST00000553778 OSBPL1AQ9BXW6 950 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 NAPBQ9H115 298 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 WDR35Q9P2L0 1181 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 LRRC42Q9Y546 428 aa10.94□□□□□ -0.66
CFAP54-204ENST00000553778 TTC26A0AVF1 554 aa10.93□□□□□ -0.66
CFAP54-204ENST00000553778 GRID2IPA4D2P6 1211 aa10.93□□□□□ -0.66
CFAP54-204ENST00000553778 PHF20L1A8MW92 1017 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms