RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 HMX1Q9NP08 348 aaPredicted RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 WRAP73Q9P2S5 460 aaPredicted RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 GNEQ9Y223 722 aaKnown RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 ARHGEF35A5YM69 484 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 TMEM150BA6NC51 233 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 ZBTB39O15060 712 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 ATG7O95352 703 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 PGK1P00558 417 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 LGALS2P05162 132 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 PLA2G4BP0C869 781 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 YWHABP31946 246 aaKnown RBP10.9□□□□□ -0.66
CHD8-204ENST00000553622 CPT1AP50416 773 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
CHD8-204ENST00000553622 FSCN1Q16658 493 aaKnown RBP10.9□□□□□ -0.66
CHD8-204ENST00000553622 DGKDQ16760 1214 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 NAALADL2Q58DX5 795 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 XKR9Q5GH70 373 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 HYIQ5T013 277 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 PLA2G4FQ68DD2 849 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 KANK3Q6NY19 840 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 SV2BQ7L1I2 683 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 GPBP1Q86WP2 473 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 LRRC15Q8TF66 581 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.66
CHD8-204ENST00000553622 PAGE5Q96GU1 130 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 SH2D3AQ9BRG2 576 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 BHMT2Q9H2M3 363 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 CUEDC2Q9H467 287 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 SMARCAD1Q9H4L7 1026 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 XPNPEP3Q9NQH7 507 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 BLOC1S4Q9NUP1 217 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 TMEM63CQ9P1W3 806 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 DDX20Q9UHI6 824 aaKnown RBP10.9□□□□□ -0.66
CHD8-204ENST00000553622 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
CHD8-204ENST00000553622 SYNRGQ9UMZ2 1314 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 IGSF9BQ9UPX0 1349 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 MYADML2A6NDP7 307 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 CTAGE5O15320 804 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 EYA4O95677 639 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 OATP04181 439 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 MUTP22033 750 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 CASP1P29466 404 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 AMPD3Q01432 767 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 RAD51AP2Q09MP3 1159 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 PNOCQ13519 176 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 POSTNQ15063 836 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 MTERF2Q49AM1 385 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 GNASQ5JWF2 1037 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 MAP3K21Q5TCX8 1036 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 OTUD6AQ7L8S5 288 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 C4orf19Q8IY42 314 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 PCYT2Q99447 389 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 BLZF1Q9H2G9 400 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 MAGEF1Q9HAY2 307 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
CHD8-204ENST00000553622 ZNF215Q9UL58 517 aaPredicted RBP10.89□□□□□ -0.67
CHD8-204ENST00000553622 Q9Y3F1 56 aa10.89□□□□□ -0.67
CHD8-204ENST00000553622 EMSYQ7Z589 1322 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 IGKV6D-21A0A0A0MT36 114 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
CHD8-204ENST00000553622 ZNF862O60290 1169 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 ZEB2O60315 1214 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 LGR5O75473 907 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 NPEPPSP55786 919 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 ASIC1P78348 528 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 XKR3Q5GH77 459 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
CHD8-204ENST00000553622 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 AFAP1L1Q8TED9 768 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 FAM167AQ96KS9 214 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 LRRC27Q9C0I9 530 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHD8-204ENST00000553622 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 ERAP1Q9NZ08 941 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 MAFBQ9Y5Q3 323 aaPredicted RBP10.88□□□□□ -0.67
CHD8-204ENST00000553622 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
CHD8-204ENST00000553622 NPHP3-ACAD11A0A0J9YXS1 232 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 SYCE3A1L190 88 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 MYMKA6NI61 221 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 A6NJR5 290 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 H3BRB1 525 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 BIN1O00499 593 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 MSCO60682 206 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 USO1O60763 962 aaKnown RBP10.87□□□□□ -0.67
CHD8-204ENST00000553622 SMC2O95347 1197 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 LYPLA2O95372 231 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 CCL5P13501 91 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 IDEP14735 1019 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 ATP4AP20648 1035 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 RARRES1P49788 294 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 SLC12A3P55017 1021 aa10.87□□□□□ -0.67
CHD8-204ENST00000553622 GJA9P57773 515 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms