RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TAAR9Q96RI9 348 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 ADAMTS10Q9H324 1103 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 SEMA4AQ9H3S1 761 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 CARS2Q9HA77 564 aaKnown RBP4.99□□□□□ -1.61
TDP1-207ENST00000553617 PDLIM7Q9NR12 457 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 DDX21Q9NR30 783 aaKnown RBP eCLIP4.99□□□□□ -1.61
TDP1-207ENST00000553617 ASH2LQ9UBL3 628 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 MSRAQ9UJ68 235 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 RCAN3Q9UKA8 241 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 PTPN22Q9Y2R2 807 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 NUB1Q9Y5A7 615 aa4.99□□□□□ -1.61
TDP1-207ENST00000553617 ANO9A1A5B4 782 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 HGSO14964 777 aaPredicted RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 NRDCO43847 1150 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 MAFKO60675 156 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 EFEMP2O95967 443 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 PHKG2P15735 406 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 HSPA6P17066 643 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 C5AR1P21730 350 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 ADKP55263 362 aaKnown RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 SRSF2Q01130 221 aaKnown RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 ADCY1Q08828 1119 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 OS9Q13438 667 aaPredicted RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 TUSC3Q13454 348 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 BRD3Q15059 726 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 ARHGAP29Q52LW3 1261 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 GALNT18Q6P9A2 607 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 TTLL7Q6ZT98 887 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 EP400NLQ6ZTU2 488 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 CEP128Q6ZU80 1094 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 CHST15Q7LFX5 561 aaPredicted RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 RTN4RL1Q86UN2 441 aaPredicted RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 NME9Q86XW9 330 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 RBM12BQ8IXT5 1001 aaKnown RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 CLEC4DQ8WXI8 215 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 FOXRED1Q96CU9 486 aaPredicted RBP4.98□□□□□ -1.61
TDP1-207ENST00000553617 LRGUKQ96M69 825 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 PLCD4Q9BRC7 762 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 C1orf112Q9NSG2 853 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 DNAJC28Q9NX36 388 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 MYOTQ9UBF9 498 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 TMEM59LQ9UK28 342 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 PPP2R3BQ9Y5P8 575 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 GPR45Q9Y5Y3 372 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 TAF6LQ9Y6J9 622 aa4.98□□□□□ -1.61
TDP1-207ENST00000553617 FRMPD2Q68DX3 1309 aaPredicted RBP4.97□□□□□ -1.61
TDP1-207ENST00000553617 ACOT7O00154 380 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 ELL2O00472 640 aaPredicted RBP4.97□□□□□ -1.61
TDP1-207ENST00000553617 FOXP2O15409 715 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 DYRK3O43781 588 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 TACR1P25103 407 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 CD96P40200 585 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 HERVK_113P62684 666 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 MRPS9P82933 396 aaKnown RBP4.97□□□□□ -1.61
TDP1-207ENST00000553617 IKZF1Q13422 519 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 KIR3DS1Q14943 382 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 ACAP2Q15057 778 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 CLUL1Q15846 466 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 LONRF3Q496Y0 759 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 TOR2AQ5JU69 321 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 ATAT1Q5SQI0 421 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 ZBTB41Q5SVQ8 909 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 IFIT1BQ5T764 474 aaKnown RBP4.97□□□□□ -1.61
TDP1-207ENST00000553617 BTBD8Q5XKL5 378 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 IL31Q6EBC2 164 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 TSHZ1Q6ZSZ6 1077 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 PHYKPLQ8IUZ5 450 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 FAM43AQ8N2R8 423 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 NETO2Q8NC67 525 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 TTLL11Q8NHH1 800 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 ASB15Q8WXK1 588 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 SEC14L1Q92503 715 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 SYTL4Q96C24 671 aaPredicted RBP4.97□□□□□ -1.61
TDP1-207ENST00000553617 ALPK1Q96QP1 1244 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 CSRNP2Q9H175 543 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 TUBD1Q9UJT1 453 aa4.97□□□□□ -1.61
TDP1-207ENST00000553617 SCO2A0A1W2PP80 73 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 TCRBV5S2A0A599 114 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 A6NNZ2 444 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 IFRD1O00458 451 aaPredicted RBP4.96□□□□□ -1.62
TDP1-207ENST00000553617 SGSM2O43147 1006 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 OFD1O75665 1012 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 POU2F2P09086 479 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 OSMP13725 252 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 HTR3AP46098 478 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 USP14P54578 494 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 CHRNEQ04844 493 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 MORC3Q14149 939 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 ZNF267Q14586 743 aaPredicted RBP4.96□□□□□ -1.62
TDP1-207ENST00000553617 NR0B2Q15466 257 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.96□□□□□ -1.62
TDP1-207ENST00000553617 CT83Q5H943 113 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 PITRM1Q5JRX3 1037 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 ARTNQ5T4W7 220 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 LILRA6Q6PI73 481 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 ESPNLQ6ZVH7 1005 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 DCP2Q8IU60 420 aaKnown RBP4.96□□□□□ -1.62
TDP1-207ENST00000553617 KRTAP1-3Q8IUG1 177 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 PDZD8Q8NEN9 1154 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 NUP43Q8NFH3 380 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms