RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CLCN2P51788 898 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 TEFQ10587 303 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 SFSWAPQ12872 951 aaKnown RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 KCNB1Q14721 858 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 BRDTQ58F21 947 aaPredicted RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 SLC10A5Q5PT55 438 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 SLC30A9Q6PML9 568 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ATG9AQ7Z3C6 839 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ARHGAP22Q7Z5H3 698 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 PI4KAP1Q8N8J0 262 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 TGFBRAP1Q8WUH2 860 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 BTN2A2Q8WVV5 523 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 GTPBP3Q969Y2 492 aaKnown RBP4.45□□□□□ -1.7
RDH11-204ENST00000553578 CEP63Q96MT8 703 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 RGL1Q9NZL6 768 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 ADAM21Q9UKJ8 722 aa4.45□□□□□ -1.7
RDH11-204ENST00000553578 PHF20L1A8MW92 1017 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 HIP1O00291 1037 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 HIP1RO75146 1068 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 UBTFL1P0CB47 393 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 RPL17P18621 184 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 CASTP20810 708 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 INPP5BP32019 993 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 EIF4A3P38919 411 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 MLLT1Q03111 559 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 LRMPQ12912 555 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 FXNQ16595 210 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 ZNF746Q6NUN9 644 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 FIGNL1Q6PIW4 674 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 MPRIPQ6WCQ1 1025 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 STAG2Q8N3U4 1231 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 CELF2-AS1Q8N7Q2 184 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 ATP11CQ8NB49 1132 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 ZNF296Q8WUU4 475 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 TCP11Q8WWU5 503 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 RBM17Q96I25 401 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 RSRC1Q96IZ7 334 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 SDF4Q9BRK5 362 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 TRIM56Q9BRZ2 755 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 SELENOOQ9BVL4 669 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 SEZ6LQ9BYH1 1024 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 INO80BQ9C086 356 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 DNAI2Q9GZS0 605 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 CASS4Q9NQ75 786 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 MIS18AQ9NYP9 233 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 NSFL1CQ9UNZ2 370 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 MRPS23Q9Y3D9 190 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.44□□□□□ -1.7
RDH11-204ENST00000553578 CAPN7Q9Y6W3 813 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 TMEM238LA0A1B0GVL6 79 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 LSM1O15116 133 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 PDPK1O15530 556 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 CPNE3O75131 537 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 HOXD10P28358 340 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 NOS2P35228 1153 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 G3BP1Q13283 466 aaKnown RBP eCLIP4.44□□□□□ -1.7
RDH11-204ENST00000553578 NECTIN1Q15223 517 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 ERCC6LQ2NKX8 1250 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 Q4G0T1 1027 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 CIAPIN1Q6FI81 312 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 PPP1R42Q7Z4L9 355 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 LCA5Q86VQ0 697 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 TTC8Q8TAM2 541 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 FRMD6Q96NE9 622 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 HELLSQ9NRZ9 838 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 TRMT1Q9NXH9 659 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 BTG4Q9NY30 223 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 RRN3Q9NYV6 651 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 DNAI1Q9UI46 699 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 MAP3K2Q9Y2U5 619 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 FRMPD2Q68DX3 1309 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 CCDC171Q6TFL3 1326 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 MAP3K15Q6ZN16 1313 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 GLRX3O76003 335 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 KIAA0754O94854 1291 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 RTN3O95197 1032 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 TBC1D8O95759 1140 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 CPP00450 1065 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 EIF2S2P20042 333 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 GPTP24298 496 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 HMGB2P26583 209 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 DEUP1Q05D60 604 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 ACTN3Q08043 901 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 TEAD4Q15561 434 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 PTPN14Q15678 1187 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 USHBP1Q8N6Y0 703 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 NKD1Q969G9 470 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 LBHD1Q9BQE6 289 aaPredicted RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 TCHPQ9BT92 498 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 PARD6BQ9BYG5 372 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 TAOK3Q9H2K8 898 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 ZDHHC3Q9NYG2 299 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 CCDC88AQ3V6T2 1871 aa4.44□□□□□ -1.7
RDH11-204ENST00000553578 MYO5AQ9Y4I1 1855 aaKnown RBP4.44□□□□□ -1.7
RDH11-204ENST00000553578 LRRC10BA6NIK2 292 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 TREHO43280 583 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 JMJD7P0C870 316 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 FGFR2P21802 821 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CES1P23141 567 aa4.43□□□□□ -1.7
RDH11-204ENST00000553578 CNTFP26441 200 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms