RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 FXR1P51114 621 aaKnown RBP eCLIP20.79■□□□□ 0.92
CPSF2-202ENST00000553427 CALCRLQ16602 461 aa20.79■□□□□ 0.92
CPSF2-202ENST00000553427 ZNF484Q5JVG2 852 aa20.79■□□□□ 0.92
CPSF2-202ENST00000553427 ZNF618Q5T7W0 954 aa20.79■□□□□ 0.92
CPSF2-202ENST00000553427 HERVK_113Q902F9 699 aa20.79■□□□□ 0.92
CPSF2-202ENST00000553427 RNPC3Q96LT9 517 aaKnown RBP20.79■□□□□ 0.92
CPSF2-202ENST00000553427 MTMR9Q96QG7 549 aa20.79■□□□□ 0.92
CPSF2-202ENST00000553427 ZBTB42B2RXF5 422 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 ZNF862O60290 1169 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 ACRP10323 421 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 THPOP40225 353 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 SPIRE1Q08AE8 756 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 FAM26DQ5JW98 314 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 MTIF3Q9H2K0 278 aaKnown RBP20.78■□□□□ 0.92
CPSF2-202ENST00000553427 NOL7Q9UMY1 257 aaKnown RBP20.78■□□□□ 0.92
CPSF2-202ENST00000553427 CEP131Q9UPN4 1083 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 PCDHA2Q9Y5H9 948 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 LAMA2P24043 3122 aaKnown RBP20.78■□□□□ 0.92
CPSF2-202ENST00000553427 KAT6AQ92794 2004 aa20.78■□□□□ 0.92
CPSF2-202ENST00000553427 MARCH6O60337 910 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 FGBP02675 491 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 OATP04181 439 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 PRKCEQ02156 737 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 GPNMBQ14956 572 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 UGCGQ16739 394 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 RUFY4Q6ZNE9 571 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 RSPH3Q86UC2 560 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 CKAP2LQ8IYA6 745 aa20.77■□□□□ 0.92
CPSF2-202ENST00000553427 MYH9P35579 1960 aaKnown RBP20.76■□□□□ 0.91
CPSF2-202ENST00000553427 RSPH10B2B2RC85 870 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 H3BQV1 296 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 EML1O00423 815 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 NBNO60934 754 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 RSPH10BP0C881 870 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 IGBP1P78318 339 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 MBTPS1Q14703 1052 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 TTC38Q5R3I4 469 aa20.76■□□□□ 0.91
CPSF2-202ENST00000553427 WDR81Q562E7 1941 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 SMIM35A0A1B0GVV1 85 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 DKC1O60832 514 aaKnown RBP eCLIP20.75■□□□□ 0.91
CPSF2-202ENST00000553427 ACTN1P12814 892 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 PDCP20941 246 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 MCM7P33993 719 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 PSMC5P62195 406 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 EPHA7Q15375 998 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 LARP1BQ659C4 914 aaKnown RBP20.75■□□□□ 0.91
CPSF2-202ENST00000553427 GPR153Q6NV75 609 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 MTHFD1LQ6UB35 978 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 DEFB128Q7Z7B8 93 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 TRAPPC12Q8WVT3 735 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 TMEM60Q9H2L4 133 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 NRBP2Q9NSY0 501 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 PCDHA12Q9UN75 941 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 SCN5AQ14524 2016 aa20.75■□□□□ 0.91
CPSF2-202ENST00000553427 SOX1O00570 391 aaPredicted RBP20.74■□□□□ 0.91
CPSF2-202ENST00000553427 BAIAP3O94812 1187 aa20.74■□□□□ 0.91
CPSF2-202ENST00000553427 C22orf31O95567 290 aa20.74■□□□□ 0.91
CPSF2-202ENST00000553427 P4HBP07237 508 aaKnown RBP20.74■□□□□ 0.91
CPSF2-202ENST00000553427 QARSP47897 775 aaKnown RBP20.74■□□□□ 0.91
CPSF2-202ENST00000553427 SMAD3P84022 425 aaKnown RBP20.74■□□□□ 0.91
CPSF2-202ENST00000553427 MGAT3Q09327 533 aa20.74■□□□□ 0.91
CPSF2-202ENST00000553427 XKR3Q5GH77 459 aa20.74■□□□□ 0.91
CPSF2-202ENST00000553427 NME8Q8N427 588 aa20.74■□□□□ 0.91
CPSF2-202ENST00000553427 NIFKQ9BYG3 293 aaKnown RBP20.74■□□□□ 0.91
CPSF2-202ENST00000553427 TTC12Q9H892 705 aaPredicted RBP20.74■□□□□ 0.91
CPSF2-202ENST00000553427 MAGEB2O15479 319 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 STBD1O95210 358 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 OR52Z1P0C646 297 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 ATP2B1P20020 1258 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 KLRC1P26715 233 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 TOB1P50616 345 aaPredicted RBP20.73■□□□□ 0.91
CPSF2-202ENST00000553427 TARBP2Q15633 366 aaKnown RBP20.73■□□□□ 0.91
CPSF2-202ENST00000553427 RILPL1Q5EBL4 403 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 MCTP1Q6DN14 999 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 CNKSR3Q6P9H4 555 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 NEK9Q8TD19 979 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 DNAJB3Q8WWF6 145 aa20.73■□□□□ 0.91
CPSF2-202ENST00000553427 CTSHP09668 335 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 MRPS6P82932 125 aaKnown RBP20.72■□□□□ 0.91
CPSF2-202ENST00000553427 ZNF174Q15697 407 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 NCAPH2Q6IBW4 605 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 OTOP2Q7RTS6 562 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 HSCBQ8IWL3 235 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 C4orf19Q8IY42 314 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
CPSF2-202ENST00000553427 ZBTB10Q96DT7 871 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 FTOQ9C0B1 505 aaKnown RBP eCLIP20.72■□□□□ 0.91
CPSF2-202ENST00000553427 CXXC1Q9P0U4 656 aaPredicted RBP20.72■□□□□ 0.91
CPSF2-202ENST00000553427 PPME1Q9Y570 386 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 TET1Q8NFU7 2136 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 KDM3AQ9Y4C1 1321 aa20.72■□□□□ 0.91
CPSF2-202ENST00000553427 LAD1O00515 517 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 EFCAB14O75071 495 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 CHRNA1P02708 482 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 TXKP42681 527 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 PLEKHG4Q58EX7 1191 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 IER5Q5VY09 327 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 LINC01465Q8N7H1 131 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 C4orf32Q8N8J7 132 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms