RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 KIF28PB7ZC32 967 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 MARCH6O60337 910 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
SHMT2-204ENST00000553324 DNAJB2P25686 324 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 ST3GAL1Q11201 340 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 IER5Q5VY09 327 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 DIS3L2Q8IYB7 885 aaKnown RBP17.31■□□□□ 0.36
SHMT2-204ENST00000553324 ETNPPLQ8TBG4 499 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 TIFAQ96CG3 184 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 MTMR10Q9NXD2 777 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 GABBR1Q9UBS5 961 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 KIF3AQ9Y496 699 aa17.31■□□□□ 0.36
SHMT2-204ENST00000553324 COL1A2P08123 1366 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 SMIM35A0A1B0GVV1 85 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 BTBD18B2RXH4 712 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 DTNBO60941 627 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 NR5A1Q13285 461 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 SLFN12Q8IYM2 578 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 DNAJB3Q8WWF6 145 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 SEPT8Q92599 483 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 APBB2Q92870 758 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 TNFRSF25Q93038 417 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 PBX4Q9BYU1 374 aa17.3■□□□□ 0.36
SHMT2-204ENST00000553324 M0QZ92 97 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 KLRC1P26715 233 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 MBTPS1Q14703 1052 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 PLEKHG4Q58EX7 1191 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 MTHFD1LQ6UB35 978 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 RUFY4Q6ZNE9 571 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 FAM43BQ6ZT52 329 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-204ENST00000553324 Q7L0L9 218 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 MIER3Q7Z3K6 550 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 UNC45AQ9H3U1 944 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 KCNMB3Q9NPA1 279 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 PCDHA11Q9Y5I1 949 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 SQORQ9Y6N5 450 aa17.29■□□□□ 0.36
SHMT2-204ENST00000553324 GRXCR1A8MXD5 290 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 MAGEB2O15479 319 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 CHMP2AO43633 222 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 SLC37A4O43826 429 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 DKC1O60832 514 aaKnown RBP eCLIP17.28■□□□□ 0.36
SHMT2-204ENST00000553324 CHRNA1P02708 482 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 CTSHP09668 335 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 ATP4AP20648 1035 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 PPP2R5CQ13362 524 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 B3GNT9Q6UX72 402 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 USP38Q8NB14 1042 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 DBF4BQ8NFT6 615 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 FBXO18Q8NFZ0 1043 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 FOXP1Q9H334 677 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-204ENST00000553324 ZNF576Q9H609 170 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 SLC28A3Q9HAS3 691 aa17.28■□□□□ 0.36
SHMT2-204ENST00000553324 IGSF9BQ9UPX0 1349 aa17.27■□□□□ 0.36
SHMT2-204ENST00000553324 DOCK5Q9H7D0 1870 aa17.27■□□□□ 0.36
SHMT2-204ENST00000553324 TMOD1P28289 359 aa17.27■□□□□ 0.36
SHMT2-204ENST00000553324 WDR5P61964 334 aaKnown RBP17.27■□□□□ 0.36
SHMT2-204ENST00000553324 MRPS6P82932 125 aaKnown RBP17.27■□□□□ 0.36
SHMT2-204ENST00000553324 EARS2Q5JPH6 523 aaKnown RBP17.27■□□□□ 0.36
SHMT2-204ENST00000553324 HERC6Q8IVU3 1022 aa17.27■□□□□ 0.36
SHMT2-204ENST00000553324 BACH2Q9BYV9 841 aa17.27■□□□□ 0.36
SHMT2-204ENST00000553324 FAM49AQ9H0Q0 323 aaPredicted RBP17.27■□□□□ 0.36
SHMT2-204ENST00000553324 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
SHMT2-204ENST00000553324 AMHP03971 560 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 OATP04181 439 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 PBX2P40425 430 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 FOSBP53539 338 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 MGAT3Q09327 533 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
SHMT2-204ENST00000553324 XKR3Q5GH77 459 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 TRAPPC12Q8WVT3 735 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 GJA10Q969M2 543 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 TMX3Q96JJ7 454 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
SHMT2-204ENST00000553324 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
SHMT2-204ENST00000553324 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 CDY2AQ9Y6F7 541 aa17.26■□□□□ 0.35
SHMT2-204ENST00000553324 TRIP12Q14669 1992 aaPredicted RBP17.26■□□□□ 0.35
SHMT2-204ENST00000553324 PSMC5P62195 406 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 GUCY1B3Q02153 619 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 CALCRLQ16602 461 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 ODR4Q5SWX8 454 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 TRMT1LQ7Z2T5 733 aaKnown RBP17.25■□□□□ 0.35
SHMT2-204ENST00000553324 HAS1Q92839 578 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 ZBED2Q9BTP6 218 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
SHMT2-204ENST00000553324 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.25■□□□□ 0.35
SHMT2-204ENST00000553324 TRPV2Q9Y5S1 764 aa17.25■□□□□ 0.35
SHMT2-204ENST00000553324 KDM3AQ9Y4C1 1321 aa17.24■□□□□ 0.35
SHMT2-204ENST00000553324 ZBTB42B2RXF5 422 aa17.24■□□□□ 0.35
SHMT2-204ENST00000553324 TLL1O43897 1013 aa17.24■□□□□ 0.35
SHMT2-204ENST00000553324 ZNF862O60290 1169 aa17.24■□□□□ 0.35
SHMT2-204ENST00000553324 NEMFO60524 1076 aa17.24■□□□□ 0.35
SHMT2-204ENST00000553324 P4HBP07237 508 aaKnown RBP17.24■□□□□ 0.35
SHMT2-204ENST00000553324 QARSP47897 775 aaKnown RBP17.24■□□□□ 0.35
SHMT2-204ENST00000553324 RABGGTBP53611 331 aa17.24■□□□□ 0.35
SHMT2-204ENST00000553324 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms