RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 OR6B2Q6IFH4 312 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 ARHGAP27Q6ZUM4 889 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 TBC1D10CQ8IV04 446 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 ABI1Q8IZP0 508 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 TTC13Q8NBP0 860 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 RBM41Q96IZ5 413 aaKnown RBP12.42□□□□□ -0.42
SYNE2-208ENST00000553289 FAM167AQ96KS9 214 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 CALN1Q9BXU9 219 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 ADAMTS1Q9UHI8 967 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 NOVA2Q9UNW9 492 aaKnown RBP12.42□□□□□ -0.42
SYNE2-208ENST00000553289 A0A087WWV3 80 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 SESN3P58005 492 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 NR1H3Q13133 447 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 GIMAP8Q8ND71 665 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-208ENST00000553289 DRC3Q9H069 523 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 ESYT2A0FGR8 921 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 K7ERI5 159 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
SYNE2-208ENST00000553289 RAD54LQ92698 747 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
SYNE2-208ENST00000553289 MSTO1Q9BUK6 570 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 APOL6Q9BWW8 343 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 SEL1LQ9UBV2 794 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 TRPM1Q7Z4N2 1603 aa12.42□□□□□ -0.42
SYNE2-208ENST00000553289 MED14O60244 1454 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 RFX1P22670 979 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 ANGPTL3Q9Y5C1 460 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 PRELPP51888 382 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 GRM4Q14833 912 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 SIX6OS1Q8N1H7 587 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 HINFPQ9BQA5 517 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 TBC1D22BQ9NU19 505 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 DONSONQ9NYP3 566 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 NEDD4P46934 1319 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 PNMA6AP0CW24 399 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 RCN2Q14257 317 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 ZKSCAN8Q15776 578 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 ARL13BQ3SXY8 428 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 PCGF5Q86SE9 256 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 ERICH1Q86X53 443 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 MASTLQ96GX5 879 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 PCDHA6Q9UN73 950 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 GDAQ9Y2T3 454 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 PCDHA8Q9Y5H6 950 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 GRID2IPA4D2P6 1211 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 MORC4Q8TE76 937 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 LY9Q9HBG7 655 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 DNAJC12Q9UKB3 198 aa12.41□□□□□ -0.42
SYNE2-208ENST00000553289 CPSF3Q9UKF6 684 aaKnown RBP12.41□□□□□ -0.42
SYNE2-208ENST00000553289 ZBED1O96006 694 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-208ENST00000553289 CTTNQ14247 550 aaKnown RBP12.4□□□□□ -0.42
SYNE2-208ENST00000553289 PYROXD1Q8WU10 500 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
SYNE2-208ENST00000553289 NUDCD1Q96RS6 583 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-208ENST00000553289 TMEM47Q9BQJ4 181 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 FAM96AQ9H5X1 160 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 ZCCHC11Q5TAX3 1644 aaKnown RBP12.4□□□□□ -0.42
SYNE2-208ENST00000553289 FGGP02679 453 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 RASIP1Q5U651 963 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 FBXO38Q6PIJ6 1188 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 FBXO40Q9UH90 709 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 F8W8V4 182 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-208ENST00000553289 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 XXYLT1Q8NBI6 393 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
SYNE2-208ENST00000553289 SMYD2Q9NRG4 433 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 NR3C1P04150 777 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 TFDP2Q14188 446 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 IQCB1Q15051 598 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 RNF207Q6ZRF8 634 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 ATP6V0A4Q9HBG4 840 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 FAM8A1Q9UBU6 413 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 FEM1BQ9UK73 627 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 ANGPTL2Q9UKU9 493 aa12.4□□□□□ -0.42
SYNE2-208ENST00000553289 CLGNO14967 610 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 MAPK13O15264 365 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 KRT37O76014 449 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 IREB2P48200 963 aaKnown RBP12.39□□□□□ -0.43
SYNE2-208ENST00000553289 DYNLT1P63172 113 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 KRT76Q01546 638 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 TNFAIP2Q03169 654 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 PTPN21Q16825 1174 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-208ENST00000553289 TTC25Q96NG3 672 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
SYNE2-208ENST00000553289 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms