RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 RAG1P15918 1043 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 PTGS1P23219 599 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 HSPA4P34932 840 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 RCAN1P53805 252 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
LINC02407-202ENST00000553247 PPP2R5BQ15173 497 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 ADCK5Q3MIX3 580 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 BRDTQ58F21 947 aaPredicted RBP9.34□□□□□ -0.91
LINC02407-202ENST00000553247 MFSD5Q6N075 450 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 NFXL1Q6ZNB6 911 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 HOMER1Q86YM7 354 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 RRP36Q96EU6 259 aaKnown RBP9.34□□□□□ -0.91
LINC02407-202ENST00000553247 GAS2L1Q99501 681 aaPredicted RBP9.34□□□□□ -0.91
LINC02407-202ENST00000553247 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
LINC02407-202ENST00000553247 PRDM5Q9NQX1 630 aaPredicted RBP9.34□□□□□ -0.91
LINC02407-202ENST00000553247 PPP4R2Q9NY27 417 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 MYH6P13533 1939 aa9.34□□□□□ -0.91
LINC02407-202ENST00000553247 MEIS2O14770 477 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 TLR3O15455 904 aaKnown RBP9.33□□□□□ -0.92
LINC02407-202ENST00000553247 STAM2O75886 525 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 GH1P01241 217 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 NEFLP07196 543 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 HOXD8P13378 290 aaPredicted RBP9.33□□□□□ -0.92
LINC02407-202ENST00000553247 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
LINC02407-202ENST00000553247 HOXA13P31271 388 aaPredicted RBP9.33□□□□□ -0.92
LINC02407-202ENST00000553247 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
LINC02407-202ENST00000553247 ARHGAP1Q07960 439 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 PGM5Q15124 567 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 SHHQ15465 462 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 FAM109BQ6ICB4 259 aaPredicted RBP9.33□□□□□ -0.92
LINC02407-202ENST00000553247 XRRA1Q6P2D8 792 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 NFRKBQ6P4R8 1299 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 SYNE3Q6ZMZ3 975 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 TMTC3Q6ZXV5 915 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 OR6J1Q8NGC5 347 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 COPS5Q92905 334 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 MYL10Q9BUA6 226 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 BRPF3Q9ULD4 1205 aa9.33□□□□□ -0.92
LINC02407-202ENST00000553247 FRMPD4Q14CM0 1322 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 LAMA2P24043 3122 aaKnown RBP9.32□□□□□ -0.92
LINC02407-202ENST00000553247 PPFIA4O75335 1185 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 REC8O95072 547 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 PLEKHA8P1O95397 391 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 SUPT20HL2P0C7V6 817 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 ICAM3P32942 547 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 EPHB4P54760 987 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 EVCP57679 992 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 FPGSQ05932 587 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 LY6KQ17RY6 165 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 MYSM1Q5VVJ2 828 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 APOA5Q6Q788 366 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 SLCO4C1Q6ZQN7 724 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 SEPT14Q6ZU15 432 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 C16orf59Q7L2K0 433 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 SESTD1Q86VW0 696 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 LRRC2Q9BYS8 371 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 AGXT2Q9BYV1 514 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 TRPV6Q9H1D0 765 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 ALDH8A1Q9H2A2 487 aaPredicted RBP9.32□□□□□ -0.92
LINC02407-202ENST00000553247 FAM217BQ9NTX9 383 aaPredicted RBP9.32□□□□□ -0.92
LINC02407-202ENST00000553247 RBM28Q9NW13 759 aaKnown RBP9.32□□□□□ -0.92
LINC02407-202ENST00000553247 SEC63Q9UGP8 760 aaKnown RBP9.32□□□□□ -0.92
LINC02407-202ENST00000553247 SNX14Q9Y5W7 946 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 SCN10AQ9Y5Y9 1956 aa9.32□□□□□ -0.92
LINC02407-202ENST00000553247 LRRC37A2A6NM11 1700 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 SPATA31C2B4DYI2 1134 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 ZBTB43O43298 467 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 CASTP20810 708 aaKnown RBP9.31□□□□□ -0.92
LINC02407-202ENST00000553247 CCND2P30279 289 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 PSMC6P62333 389 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 MRPS9P82933 396 aaKnown RBP9.31□□□□□ -0.92
LINC02407-202ENST00000553247 DGKDQ16760 1214 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 C9orf50Q5SZB4 431 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 CELF3Q5SZQ8 465 aaKnown RBP9.31□□□□□ -0.92
LINC02407-202ENST00000553247 RASIP1Q5U651 963 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 CMTR1Q8N1G2 835 aaKnown RBP9.31□□□□□ -0.92
LINC02407-202ENST00000553247 TMEM199Q8N511 208 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 PPTC7Q8NI37 304 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 AFG1LQ8WV93 481 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 KAT2BQ92831 832 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 INPP4AQ96PE3 977 aaPredicted RBP9.31□□□□□ -0.92
LINC02407-202ENST00000553247 USP26Q9BXU7 913 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 PSTPIP2Q9H939 334 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 KIAA1217Q5T5P2 1943 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 LTBP2Q14767 1821 aa9.31□□□□□ -0.92
LINC02407-202ENST00000553247 HAS3O00219 553 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 B4GALT4O60513 344 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 MMP3P08254 477 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 MYL3P08590 195 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 H2AFB1P0C5Y9 115 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 H2AFB2P0C5Z0 115 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 MYCLP12524 364 aaPredicted RBP9.3□□□□□ -0.92
LINC02407-202ENST00000553247 RXRAP19793 462 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 PSMA5P28066 241 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 SMAD3P84022 425 aaKnown RBP9.3□□□□□ -0.92
LINC02407-202ENST00000553247 SP2Q02086 613 aa9.3□□□□□ -0.92
LINC02407-202ENST00000553247 PPIGQ13427 754 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC02407-202ENST00000553247 PCNX4Q63HM2 1172 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms