RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 RSPH10B2B2RC85 870 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
TMEM116-218ENST00000552839 MMP1P03956 469 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 NR3C2P08235 984 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 RSPH10BP0C881 870 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 HOXD8P13378 290 aaPredicted RBP12.91□□□□□ -0.34
TMEM116-218ENST00000552839 ZNF76P36508 570 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 THPOP40225 353 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
TMEM116-218ENST00000552839 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 YME1L1Q96TA2 773 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 ANO3Q9BYT9 981 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 PRKAG3Q9UGI9 489 aa12.91□□□□□ -0.34
TMEM116-218ENST00000552839 PIK3CDO00329 1044 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 SORBS3O60504 671 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 PPFIA4O75335 1185 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 RGS20O76081 388 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 UPP2O95045 317 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
TMEM116-218ENST00000552839 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
TMEM116-218ENST00000552839 IRS1P35568 1242 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 LTBRP36941 435 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 HSD17B4P51659 736 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 NONOQ15233 471 aaKnown RBP eCLIP12.9□□□□□ -0.34
TMEM116-218ENST00000552839 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 SERINC5Q86VE9 423 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 ADHFE1Q8IWW8 467 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 DAGLBQ8NCG7 672 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 FBXO18Q8NFZ0 1043 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 RASGRP4Q8TDF6 673 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 PGBD1Q96JS3 809 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 PHF20Q9BVI0 1012 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 NSUN3Q9H649 340 aaKnown RBP12.9□□□□□ -0.34
TMEM116-218ENST00000552839 CLDND1Q9NY35 253 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 NOL7Q9UMY1 257 aaKnown RBP12.9□□□□□ -0.34
TMEM116-218ENST00000552839 FAM50BQ9Y247 325 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 DOCK5Q9H7D0 1870 aa12.9□□□□□ -0.34
TMEM116-218ENST00000552839 KAT6AQ92794 2004 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-218ENST00000552839 STX6O43752 255 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 CCND2P30279 289 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 CELF3Q5SZQ8 465 aaKnown RBP12.89□□□□□ -0.35
TMEM116-218ENST00000552839 RPAINQ86UA6 219 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 SPATA33Q96N06 139 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 C16orf70Q9BSU1 422 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 GJB4Q9NTQ9 266 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 TMEM260Q9NX78 707 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 PCDHA6Q9UN73 950 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 PCDHA8Q9Y5H6 950 aa12.89□□□□□ -0.35
TMEM116-218ENST00000552839 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 MEIS2O14770 477 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 OPLAHO14841 1288 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 TREHO43280 583 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 GGPS1O95749 300 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 HOXC8P31273 242 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 SP2Q02086 613 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 PIK3AP1Q6ZUJ8 805 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 SEPT8Q92599 483 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 ATP6V0A1Q93050 837 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 TCEAL9Q9UHQ7 104 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 TECTAO75443 2155 aa12.88□□□□□ -0.35
TMEM116-218ENST00000552839 BTBD18B2RXH4 712 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 MARCH6O60337 910 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 CTSHP09668 335 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 SYT1P21579 422 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 DLX2Q07687 328 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 NR5A1Q13285 461 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 SMAD2Q15796 467 aaKnown RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 CLUL1Q15846 466 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 CTC1Q2NKJ3 1217 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 GNPTABQ3T906 1256 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 FOXD4L5Q5VV16 416 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 FOXD4L4Q8WXT5 416 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 ZFP91Q96JP5 570 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 PHOX2BQ99453 314 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 NAP1L4Q99733 375 aaKnown RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 PDCD2LQ9BRP1 358 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-218ENST00000552839 RNPEPQ9H4A4 650 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 MUTYHQ9UIF7 546 aa12.87□□□□□ -0.35
TMEM116-218ENST00000552839 H3BRB1 525 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 MBTPS2O43462 519 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 LINC00271P0C7V0 271 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 SMIM10L2AP0DMW4 78 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 SMIM10L2BP0DMW5 78 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 UBA1P22314 1058 aaKnown RBP12.86□□□□□ -0.35
TMEM116-218ENST00000552839 GHRHRQ02643 423 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 HYAL1Q12794 435 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 PGM5Q15124 567 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 INF2Q27J81 1249 aa12.86□□□□□ -0.35
TMEM116-218ENST00000552839 LETM2Q2VYF4 491 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms