RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TRIM71Q2Q1W2 868 aaKnown RBP20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 ZNF484Q5JVG2 852 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 TTC38Q5R3I4 469 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 TMEM240Q5SV17 173 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 ZNF618Q5T7W0 954 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 LARP1BQ659C4 914 aaKnown RBP20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 CEP131Q9UPN4 1083 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 COL1A2P08123 1366 aa20.8■□□□□ 0.92
PRPF40B-216ENST00000552301 SCN5AQ14524 2016 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 MBLAC1A4D2B0 266 aaPredicted RBP20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 RSPH10B2B2RC85 870 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 KIF28PB7ZC32 967 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 RSPH10BP0C881 870 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 PRKCEQ02156 737 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 ORC2Q13416 577 aaPredicted RBP20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 LRIT3Q3SXY7 679 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 NCAPH2Q6IBW4 605 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 TRAPPC12Q8WVT3 735 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 HAS1Q92839 578 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 NRBP2Q9NSY0 501 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 VAV3Q9UKW4 847 aa20.79■□□□□ 0.92
PRPF40B-216ENST00000552301 DKC1O60832 514 aaKnown RBP eCLIP20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 OATP04181 439 aa20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 PDCP20941 246 aa20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 U2AF2P26368 475 aaKnown RBP eCLIP20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 B3GNT9Q6UX72 402 aa20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 C16orf59Q7L2K0 433 aa20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 FAM49AQ9H0Q0 323 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 PCDHA12Q9UN75 941 aa20.78■□□□□ 0.92
PRPF40B-216ENST00000552301 WDR81Q562E7 1941 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 ZBBXA8MT70 800 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 M0QZ92 97 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 WNT7AO00755 349 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 TXKP42681 527 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 ZNF174Q15697 407 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 UGCGQ16739 394 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 RUFY4Q6ZNE9 571 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 OTOP2Q7RTS6 562 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 HERVK_113Q902F9 699 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 SNX21Q969T3 373 aa20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 INTS4Q96HW7 963 aaKnown RBP20.77■□□□□ 0.92
PRPF40B-216ENST00000552301 ATP4AP20648 1035 aa20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 FXR1P51114 621 aaKnown RBP eCLIP20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 PSMC5P62195 406 aa20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 MARCH8Q5T0T0 291 aa20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 MTHFD1LQ6UB35 978 aa20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 BANK1Q8NDB2 785 aa20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 DNAJB3Q8WWF6 145 aa20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 TTC12Q9H892 705 aaPredicted RBP20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 SEPT9Q9UHD8 586 aaPredicted RBP20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 PCDHA2Q9Y5H9 948 aa20.76■□□□□ 0.91
PRPF40B-216ENST00000552301 RANBP2P49792 3224 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 VPS37CA5D8V6 355 aaPredicted RBP20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 EML1O00423 815 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 ZNF862O60290 1169 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 HSP90AA1P07900 732 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 OR52Z1P0C646 297 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 KLRC1P26715 233 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 QARSP47897 775 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 EPHA7Q15375 998 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 XKR3Q5GH77 459 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 RPAINQ86UA6 219 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 ZBTB10Q96DT7 871 aa20.75■□□□□ 0.91
PRPF40B-216ENST00000552301 SMIM35A0A1B0GVV1 85 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 NBNO60934 754 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 P4HBP07237 508 aaKnown RBP20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 MRPS6P82932 125 aaKnown RBP20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 IER5Q5VY09 327 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 CNKSR3Q6P9H4 555 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 TRAF7Q6Q0C0 670 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 MTMR9Q96QG7 549 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 TMEM60Q9H2L4 133 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 FOXD4L1Q9NU39 408 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 SLC4A7Q9Y6M7 1214 aa20.74■□□□□ 0.91
PRPF40B-216ENST00000552301 SOX1O00570 391 aaPredicted RBP20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 MAGEB2O15479 319 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 CXCL10P02778 98 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 TBC1D8BQ0IIM8 1120 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 TMEM266Q2M3C6 531 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 RILPL1Q5EBL4 403 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 METTL13Q8N6R0 699 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 TET1Q8NFU7 2136 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 NEK9Q8TD19 979 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 LXNQ9BS40 222 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 SZT2Q5T011 3432 aa20.73■□□□□ 0.91
PRPF40B-216ENST00000552301 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 DDX11L8A8MPP1 907 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 ZBTB42B2RXF5 422 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 BAIAP3O94812 1187 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 C22orf31O95567 290 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 KCNJ6P48051 423 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 CYP4A11Q02928 519 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 SPIRE1Q08AE8 756 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 NBR1Q14596 966 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 MBTPS1Q14703 1052 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 MTERF2Q49AM1 385 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 FAM26DQ5JW98 314 aa20.72■□□□□ 0.91
PRPF40B-216ENST00000552301 RASIP1Q5U651 963 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms