RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 GNL2Q13823 731 aaKnown RBP5.73□□□□□ -1.49
USP44-207ENST00000552237 TNNI3KQ59H18 835 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 RSPO2Q6UXX9 243 aaPredicted RBP5.73□□□□□ -1.49
USP44-207ENST00000552237 USP30Q70CQ3 517 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 VPS37DQ86XT2 251 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 PDGFDQ9GZP0 370 aaPredicted RBP5.73□□□□□ -1.49
USP44-207ENST00000552237 NELFAQ9H3P2 528 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 IGSF5Q9NSI5 407 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 CEP72Q9P209 647 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 FBXO10Q9UK96 956 aa5.73□□□□□ -1.49
USP44-207ENST00000552237 GRIA2P42262 883 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 MEOX1P50221 254 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 ATXN1P54253 815 aaKnown RBP5.72□□□□□ -1.49
USP44-207ENST00000552237 EPHA5P54756 1037 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 PPP2R2AP63151 447 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 DBPQ10586 325 aaPredicted RBP5.72□□□□□ -1.49
USP44-207ENST00000552237 TBR1Q16650 682 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 EEPD1Q7L9B9 569 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 OTOP2Q7RTS6 562 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 ADGRE4PQ86SQ3 457 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 TMEM176AQ96HP8 235 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 ZDHHC5Q9C0B5 715 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 PCSK5Q92824 1860 aa5.72□□□□□ -1.49
USP44-207ENST00000552237 ACOT7O00154 380 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 PDE6AP16499 860 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 ATF4P18848 351 aaPredicted RBP5.71□□□□□ -1.5
USP44-207ENST00000552237 ZC3H6P61129 1189 aaKnown RBP5.71□□□□□ -1.5
USP44-207ENST00000552237 CSRP2Q16527 193 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 BTBD8Q5XKL5 378 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 PCSK4Q6UW60 755 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 LBX2Q6XYB7 198 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 TMPRSS6Q8IU80 811 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 ULK2Q8IYT8 1036 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 RTKN2Q8IZC4 609 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 WDR48Q8TAF3 677 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 CD244Q9BZW8 370 aa5.71□□□□□ -1.5
USP44-207ENST00000552237 FAM47E-STBD1D6RA91 191 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 FXNQ16595 210 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 LAIR1Q6GTX8 287 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 OR14K1Q8NGZ2 314 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 DCAF4Q8WV16 495 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 CFHR4Q92496 578 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 EPN3Q9H201 632 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 OR10A2Q9H208 303 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 RIC8BQ9NVN3 520 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 FAM184BQ9ULE4 1060 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 MRVI1Q9Y6F6 885 aa5.7□□□□□ -1.5
USP44-207ENST00000552237 FOXN1O15353 648 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 PEX11BO96011 259 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 SOD2P04179 222 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 SSBP05455 408 aaKnown RBP eCLIP5.69□□□□□ -1.5
USP44-207ENST00000552237 HABP4Q5JVS0 413 aaKnown RBP5.69□□□□□ -1.5
USP44-207ENST00000552237 MRM1Q6IN84 353 aaKnown RBP5.69□□□□□ -1.5
USP44-207ENST00000552237 EP400NLQ6ZTU2 488 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 LARP4Q71RC2 724 aaKnown RBP eCLIP5.69□□□□□ -1.5
USP44-207ENST00000552237 FILIP1Q7Z7B0 1213 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 ZFYVE21Q9BQ24 234 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 TINF2Q9BSI4 451 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 ALG1Q9BT22 464 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 CDC42EP3Q9UKI2 254 aa5.69□□□□□ -1.5
USP44-207ENST00000552237 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 DLX3O60479 287 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 RPS6KA4O75676 772 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 IL12RB1P42701 662 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 MRE11P49959 708 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 IL13RA1P78552 427 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 MRPS21P82921 87 aaKnown RBP5.68□□□□□ -1.5
USP44-207ENST00000552237 ARID5AQ03989 594 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 RRP1BQ14684 758 aaKnown RBP5.68□□□□□ -1.5
USP44-207ENST00000552237 PCOLCEQ15113 449 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 KCNT2Q6UVM3 1135 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 CXXC5Q7LFL8 322 aaKnown RBP5.68□□□□□ -1.5
USP44-207ENST00000552237 GPR135Q8IZ08 494 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 NLGN4XQ8N0W4 816 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 SHCBP1Q8NEM2 672 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.68□□□□□ -1.5
USP44-207ENST00000552237 INCENPQ9NQS7 918 aa5.68□□□□□ -1.5
USP44-207ENST00000552237 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.67□□□□□ -1.5
USP44-207ENST00000552237 SLC26A4O43511 780 aa5.67□□□□□ -1.5
USP44-207ENST00000552237 PTPN1P18031 435 aaKnown RBP5.67□□□□□ -1.5
USP44-207ENST00000552237 PTGS1P23219 599 aa5.67□□□□□ -1.5
USP44-207ENST00000552237 GPR85P60893 370 aa5.67□□□□□ -1.5
USP44-207ENST00000552237 CCDC142Q17RM4 750 aa5.67□□□□□ -1.5
USP44-207ENST00000552237 SLC10A6Q3KNW5 377 aa5.67□□□□□ -1.5
USP44-207ENST00000552237 ZNF662Q6ZS27 426 aa5.67□□□□□ -1.5
USP44-207ENST00000552237 NPM2Q86SE8 214 aaKnown RBP5.67□□□□□ -1.5
USP44-207ENST00000552237 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP44-207ENST00000552237 A0A1W2PQU0 124 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 NUDT3O95989 172 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 KRT4P19013 534 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 CNGB1Q14028 1251 aaPredicted RBP5.66□□□□□ -1.5
USP44-207ENST00000552237 HSP90AA2PQ14568 343 aaPredicted RBP5.66□□□□□ -1.5
USP44-207ENST00000552237 EIF4HQ15056 248 aaKnown RBP5.66□□□□□ -1.5
USP44-207ENST00000552237 NAALADL2Q58DX5 795 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 ANKRD35Q8N283 1001 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 NRDE2Q9H7Z3 1164 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 IPPKQ9H8X2 491 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 GALNT8Q9NY28 637 aa5.66□□□□□ -1.5
USP44-207ENST00000552237 A0A0G2JNJ9 132 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms