RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ADAM9Q13443 819 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 UGCGQ16739 394 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 CCDC60Q8IWA6 550 aaPredicted RBP9.02□□□□□ -0.96
CHPT1-208ENST00000552215 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.96
CHPT1-208ENST00000552215 MAP7D2Q96T17 732 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 PYM1Q9BRP8 204 aaKnown RBP9.02□□□□□ -0.96
CHPT1-208ENST00000552215 LRRC27Q9C0I9 530 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 GBP3Q9H0R5 595 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 AGO4Q9HCK5 861 aaKnown RBP9.02□□□□□ -0.96
CHPT1-208ENST00000552215 PFASO15067 1338 aa9.02□□□□□ -0.96
CHPT1-208ENST00000552215 LAD1O00515 517 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 RGS2P41220 211 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 PTPROQ16827 1216 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 AK8Q96MA6 479 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 TINF2Q9BSI4 451 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 XPO4Q9C0E2 1151 aaKnown RBP9.02□□□□□ -0.97
CHPT1-208ENST00000552215 COL4A3BPQ9Y5P4 624 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 TISP43B9A030 160 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 ADCY3O60266 1144 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 MAPK4P31152 587 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 APLP1P51693 650 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 PSMC5P62195 406 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 FANCCQ00597 558 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 ACVR2BQ13705 512 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 ARHGAP44Q17R89 818 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 KIZQ2M2Z5 673 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 STXBP4Q6ZWJ1 553 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 GTPBP4Q9BZE4 634 aaKnown RBP9.02□□□□□ -0.97
CHPT1-208ENST00000552215 POLR3FQ9H1D9 316 aaPredicted RBP9.02□□□□□ -0.97
CHPT1-208ENST00000552215 PARVGQ9HBI0 331 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 CCDC88AQ3V6T2 1871 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 LRP5O75197 1615 aa9.02□□□□□ -0.97
CHPT1-208ENST00000552215 IPO7O95373 1038 aaKnown RBP9.01□□□□□ -0.97
CHPT1-208ENST00000552215 KRT13P13646 458 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
CHPT1-208ENST00000552215 NR2F2P24468 414 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 NT5C2P49902 561 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
CHPT1-208ENST00000552215 KCNA1Q09470 495 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 COASYQ13057 564 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 ARMCX5Q6P1M9 558 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 DENND3A2RUS2 1198 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 K7ERI5 159 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 SP2Q02086 613 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 OTOP1Q7RTM1 612 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 NPLOC4Q8TAT6 608 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 FNBP1Q96RU3 617 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 TRIM9Q9C026 710 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 GINM1Q9NU53 330 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 PNMA2Q9UL42 364 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 TLR2O60603 784 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 SLITRK3O94933 977 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 RARBP10826 455 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 HOXD10P28358 340 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 FKBP1BP68106 108 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 PPFIA1Q13136 1202 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 MORC3Q14149 939 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 EPHA7Q15375 998 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 PCNX4Q63HM2 1172 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 GPAT2Q6NUI2 795 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 DAGLBQ8NCG7 672 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 TNFRSF25Q93038 417 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 PGAP2Q9UHJ9 254 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 TMCO5BA8MYB1 307 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 CETN3O15182 167 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 ERLIN2O94905 339 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 UPP2O95045 317 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 ARIH2O95376 493 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 CCNE2O96020 404 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 TFRCP02786 760 aaKnown RBP9.01□□□□□ -0.97
CHPT1-208ENST00000552215 SLC9C1Q4G0N8 1177 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 MCTP2Q6DN12 878 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 PNMA5Q96PV4 448 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 SPAG5Q96R06 1193 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 PARP2Q9UGN5 583 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 FRMD4BQ9Y2L6 1034 aa9.01□□□□□ -0.97
CHPT1-208ENST00000552215 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
CHPT1-208ENST00000552215 GH1P01241 217 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 ZBTB48P10074 688 aaPredicted RBP9□□□□□ -0.97
CHPT1-208ENST00000552215 SSTR3P32745 418 aaPredicted RBP9□□□□□ -0.97
CHPT1-208ENST00000552215 ACOT2P49753 483 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 ARID5BQ14865 1188 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 MYPNQ86TC9 1320 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 SFPQP23246 707 aaKnown RBP eCLIP9□□□□□ -0.97
CHPT1-208ENST00000552215 TMOD1P28289 359 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 SSR1P43307 286 aaKnown RBP9□□□□□ -0.97
CHPT1-208ENST00000552215 ZNF200P98182 395 aaPredicted RBP9□□□□□ -0.97
CHPT1-208ENST00000552215 KIAA0753Q2KHM9 967 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 EFCAB12Q6NXP0 572 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 MLKLQ8NB16 471 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 DEFB118Q96PH6 123 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 ZNF215Q9UL58 517 aaPredicted RBP9□□□□□ -0.97
CHPT1-208ENST00000552215 COL24A1Q17RW2 1714 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 MYO7AQ13402 2215 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 TRIM49P0CI25 452 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 TRIM49CP0CI26 452 aa9□□□□□ -0.97
CHPT1-208ENST00000552215 NOL9Q5SY16 702 aaKnown RBP9□□□□□ -0.97
CHPT1-208ENST00000552215 TLK2Q86UE8 772 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms