RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 KMT2EQ8IZD2 1858 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 SPDYE3A6NKU9 549 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 LOC730098B7Z3J9 87 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 GLP2RO95838 553 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 GATMP50440 423 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 PBXIP1Q96AQ6 731 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 PHOX2BQ99453 314 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 AZI2Q9H6S1 392 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 JADE2Q9NQC1 790 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 USP15Q9Y4E8 981 aaPredicted RBP18.71■□□□□ 0.59
RAB5C-209ENST00000552162 PCDHGC5Q9Y5F6 944 aa18.71■□□□□ 0.59
RAB5C-209ENST00000552162 MAFGO15525 162 aa18.7■□□□□ 0.58
RAB5C-209ENST00000552162 CHMLP26374 656 aa18.7■□□□□ 0.58
RAB5C-209ENST00000552162 GNAQP50148 359 aa18.7■□□□□ 0.58
RAB5C-209ENST00000552162 CMTR1Q8N1G2 835 aaKnown RBP18.7■□□□□ 0.58
RAB5C-209ENST00000552162 SRBD1Q8N5C6 995 aaKnown RBP18.7■□□□□ 0.58
RAB5C-209ENST00000552162 TRAPPC12Q8WVT3 735 aa18.7■□□□□ 0.58
RAB5C-209ENST00000552162 CELF4Q9BZC1 486 aaKnown RBP18.7■□□□□ 0.58
RAB5C-209ENST00000552162 SLC9A2Q9UBY0 812 aa18.7■□□□□ 0.58
RAB5C-209ENST00000552162 LRFN2Q9ULH4 789 aa18.7■□□□□ 0.58
RAB5C-209ENST00000552162 PCDHA2Q9Y5H9 948 aa18.7■□□□□ 0.58
RAB5C-209ENST00000552162 FNDC1Q4ZHG4 1894 aaPredicted RBP18.69■□□□□ 0.58
RAB5C-209ENST00000552162 IBSPP21815 317 aaPredicted RBP18.69■□□□□ 0.58
RAB5C-209ENST00000552162 PDE4AP27815 886 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 PTPN5P54829 565 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 ZXDAP98168 799 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 CBX2Q14781 532 aaPredicted RBP18.69■□□□□ 0.58
RAB5C-209ENST00000552162 IER5LQ5T953 404 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 CASC1Q6TDU7 716 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 SUGP1Q8IWZ8 645 aaKnown RBP18.69■□□□□ 0.58
RAB5C-209ENST00000552162 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 TNPO1Q92973 898 aaKnown RBP18.69■□□□□ 0.58
RAB5C-209ENST00000552162 TMX1Q9H3N1 280 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 PCDHA6Q9UN73 950 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 PCDHA8Q9Y5H6 950 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 USP34Q70CQ2 3546 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 ZDBF2Q9HCK1 2354 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 KDM3AQ9Y4C1 1321 aa18.69■□□□□ 0.58
RAB5C-209ENST00000552162 hCG_1642624A0A1W2PR95 340 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 PPFIA3O75145 1194 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 RXRAP19793 462 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 PLCB4Q15147 1175 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 PKN1Q16512 942 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 TMEM266Q2M3C6 531 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 NFXL1Q6ZNB6 911 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 PHF7Q9BWX1 381 aaPredicted RBP18.68■□□□□ 0.58
RAB5C-209ENST00000552162 TLE6Q9H808 572 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 KCNH7Q9NS40 1196 aa18.68■□□□□ 0.58
RAB5C-209ENST00000552162 SMIM35A0A1B0GVV1 85 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 CCDC69A6NI79 296 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 SGSM2O43147 1006 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 PRC1O43663 620 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 SARSP49591 514 aaKnown RBP18.67■□□□□ 0.58
RAB5C-209ENST00000552162 ACTR2P61160 394 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 KRT76Q01546 638 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 SPOUT1Q5T280 376 aaKnown RBP18.67■□□□□ 0.58
RAB5C-209ENST00000552162 PLPPR4Q7Z2D5 763 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 MICAL1Q8TDZ2 1067 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 PRRX2Q99811 253 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 SDF4Q9BRK5 362 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 MTA3Q9BTC8 594 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 TLR9Q9NR96 1032 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 PCDHB12Q9Y5F1 795 aa18.67■□□□□ 0.58
RAB5C-209ENST00000552162 SH2B2O14492 632 aaPredicted RBP18.66■□□□□ 0.58
RAB5C-209ENST00000552162 PER2O15055 1255 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 STAT5BP51692 787 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 RBM10P98175 930 aaKnown RBP18.66■□□□□ 0.58
RAB5C-209ENST00000552162 UBE3AQ05086 875 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 NFX1Q12986 1120 aaKnown RBP18.66■□□□□ 0.58
RAB5C-209ENST00000552162 MTHFD1LQ6UB35 978 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 HEATR3Q7Z4Q2 680 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 NME8Q8N427 588 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 FBXL6Q8N531 539 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 MAP4K1Q92918 833 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 RPGRIP1Q96KN7 1286 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 MXRA8Q9BRK3 442 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 AAASQ9NRG9 546 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 GINS2Q9Y248 185 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 PCDHB7Q9Y5E2 793 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 RBM8AQ9Y5S9 174 aaKnown RBP18.66■□□□□ 0.58
RAB5C-209ENST00000552162 NFASCO94856 1347 aa18.66■□□□□ 0.58
RAB5C-209ENST00000552162 FSD2A1L4K1 749 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 MGEA5O60502 916 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 CALM1P0DP23 149 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 CALM2P0DP24 149 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 CALM3P0DP25 149 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 SIGLEC14Q08ET2 396 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 TCF15Q12870 199 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 RAB11FIP4Q86YS3 637 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 TMTC2Q8N394 836 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 VN1R2Q8NFZ6 395 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 CYP2W1Q8TAV3 490 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 ATP8B4Q8TF62 1192 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 ERVK-5Q9HDB9 667 aa18.65■□□□□ 0.58
RAB5C-209ENST00000552162 DENND3A2RUS2 1198 aa18.64■□□□□ 0.57
RAB5C-209ENST00000552162 TBKBP1A7MCY6 615 aa18.64■□□□□ 0.57
RAB5C-209ENST00000552162 FGF18O76093 207 aa18.64■□□□□ 0.57
RAB5C-209ENST00000552162 ATF7P17544 494 aaPredicted RBP18.64■□□□□ 0.57
RAB5C-209ENST00000552162 MCM5P33992 734 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms