RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SARSP49591 514 aaKnown RBP17.63■□□□□ 0.41
CACNB3-220ENST00000551716 ERVFC1P60507 584 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 RBM10P98175 930 aaKnown RBP17.63■□□□□ 0.41
CACNB3-220ENST00000551716 ITIH3Q06033 890 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 SEMA3FQ13275 785 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
CACNB3-220ENST00000551716 SYCE2Q6PIF2 218 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 NME8Q8N427 588 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 CNNM2Q9H8M5 875 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 TRPV2Q9Y5S1 764 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 PLXNA3P51805 1871 aa17.63■□□□□ 0.41
CACNB3-220ENST00000551716 PNMA6FA0A0J9YX94 578 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 PALM3A6NDB9 673 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-220ENST00000551716 BRD1O95696 1058 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 ODR4Q5SWX8 454 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 PCNX4Q63HM2 1172 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 CASP10Q92851 521 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 SEMA4AQ9H3S1 761 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 RIOX1Q9H6W3 641 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 MAD2L2Q9UI95 211 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 SALL3Q9BXA9 1300 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 IGSF9BQ9UPX0 1349 aa17.62■□□□□ 0.41
CACNB3-220ENST00000551716 PDE1AP54750 535 aa17.61■□□□□ 0.41
CACNB3-220ENST00000551716 PLCB3Q01970 1234 aa17.61■□□□□ 0.41
CACNB3-220ENST00000551716 CUL5Q93034 780 aa17.61■□□□□ 0.41
CACNB3-220ENST00000551716 CELF4Q9BZC1 486 aaKnown RBP17.61■□□□□ 0.41
CACNB3-220ENST00000551716 FAM49AQ9H0Q0 323 aaPredicted RBP17.61■□□□□ 0.41
CACNB3-220ENST00000551716 ADAM7Q9H2U9 754 aa17.61■□□□□ 0.41
CACNB3-220ENST00000551716 C1orf112Q9NSG2 853 aa17.61■□□□□ 0.41
CACNB3-220ENST00000551716 PCDHA2Q9Y5H9 948 aa17.61■□□□□ 0.41
CACNB3-220ENST00000551716 LAG3P18627 525 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 MARK3P27448 753 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 MTHFRP42898 656 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 GATMP50440 423 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 IGBP1P78318 339 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 KRT17Q04695 432 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 IMMTQ16891 758 aaKnown RBP17.6■□□□□ 0.41
CACNB3-220ENST00000551716 SLC24A5Q71RS6 500 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 PLCD3Q8N3E9 789 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 COLGALT1Q8NBJ5 622 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 MRPS27Q92552 414 aaKnown RBP17.6■□□□□ 0.41
CACNB3-220ENST00000551716 GPRASP2Q96D09 838 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 PIGSQ96S52 555 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 TCF25Q9BQ70 676 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 ENTPD7Q9NQZ7 604 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 TYW1Q9NV66 732 aaKnown RBP17.6■□□□□ 0.41
CACNB3-220ENST00000551716 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
CACNB3-220ENST00000551716 KAT6AQ92794 2004 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 TBKBP1A7MCY6 615 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 INSRRP14616 1297 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 SP100P23497 879 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-220ENST00000551716 KRT76Q01546 638 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 NFX1Q12986 1120 aaKnown RBP17.59■□□□□ 0.41
CACNB3-220ENST00000551716 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 ZDHHC14Q8IZN3 488 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 SMARCC2Q8TAQ2 1214 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 TELO2Q9Y4R8 837 aa17.59■□□□□ 0.41
CACNB3-220ENST00000551716 DENND3A2RUS2 1198 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 C2CD4DB7Z1M9 353 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 MAFGO15525 162 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 BMS1Q14692 1282 aaKnown RBP17.58■□□□□ 0.4
CACNB3-220ENST00000551716 PLPP4Q5VZY2 271 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 LLGL2Q6P1M3 1020 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 DGLUCYQ7Z3D6 616 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 APOL5Q9BWW9 433 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 TMX1Q9H3N1 280 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 AZI2Q9H6S1 392 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 ATP6V0A4Q9HBG4 840 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 RGS18Q9NS28 235 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 USTQ9Y2C2 406 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 DMDP11532 3685 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 DCHS1Q96JQ0 3298 aa17.58■□□□□ 0.4
CACNB3-220ENST00000551716 MYH6P13533 1939 aa17.57■□□□□ 0.4
CACNB3-220ENST00000551716 SMIM35A0A1B0GVV1 85 aa17.57■□□□□ 0.4
CACNB3-220ENST00000551716 PIK3CDO00329 1044 aa17.57■□□□□ 0.4
CACNB3-220ENST00000551716 KCNA2P16389 499 aa17.57■□□□□ 0.4
CACNB3-220ENST00000551716 PPM1AP35813 382 aa17.57■□□□□ 0.4
CACNB3-220ENST00000551716 TMEM62Q0P6H9 643 aa17.57■□□□□ 0.4
CACNB3-220ENST00000551716 RTP3Q9BQQ7 232 aa17.57■□□□□ 0.4
CACNB3-220ENST00000551716 GPR182O15218 404 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 GRM4Q14833 912 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 SEC23AQ15436 765 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 ATAT1Q5SQI0 421 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 FAM102BQ5T8I3 360 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 TDRD5Q8NAT2 981 aaKnown RBP17.56■□□□□ 0.4
CACNB3-220ENST00000551716 KCNG4Q8TDN1 519 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 ADAM2Q99965 735 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 POMKQ9H5K3 350 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 ELAC1Q9H777 363 aaKnown RBP17.56■□□□□ 0.4
CACNB3-220ENST00000551716 LIMD1Q9UGP4 676 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
CACNB3-220ENST00000551716 EP300Q09472 2414 aaPredicted RBP17.55■□□□□ 0.4
CACNB3-220ENST00000551716 HIDE1A8MVS5 230 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 HOXA2O43364 376 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 ATP9AO75110 1047 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms