RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 TMEM150BA6NC51 233 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 ZBTB42B2RXF5 422 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 HBP1O60381 514 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 SLITRK3O94933 977 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 RAG1P15918 1043 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 QARSP47897 775 aaKnown RBP17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 PSMC5P62195 406 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 CYP4A11Q02928 519 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 CEBPZQ03701 1054 aaKnown RBP17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 FOXD4L6Q3SYB3 417 aaPredicted RBP17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 FOXD4L3Q6VB84 417 aaPredicted RBP17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 TPH2Q8IWU9 490 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 HSD17B14Q9BPX1 270 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 NOC4LQ9BVI4 516 aaKnown RBP17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 PRKAG2Q9UGJ0 569 aa17.03■□□□□ 0.32
SMARCD1-211ENST00000551497 DDX11L8A8MPP1 907 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 LAD1O00515 517 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 ZBTB39O15060 712 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 F13A1P00488 732 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 TIMP1P01033 207 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 P4HBP07237 508 aaKnown RBP17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 GNAT1P11488 350 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 PDIA4P13667 645 aaKnown RBP17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 PRKCEQ02156 737 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 PTPAQ15257 358 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 DTHD1Q6ZMT9 781 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 RUFY4Q6ZNE9 571 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 SERINC5Q86VE9 423 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 BADQ92934 168 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 USP28Q96RU2 1077 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 SH2D3AQ9BRG2 576 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 HIPK3Q9H422 1215 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 NRBP2Q9NSY0 501 aa17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.32
SMARCD1-211ENST00000551497 RRN3P2A6NIE6 340 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 PP2D1A8MPX8 630 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 OATP04181 439 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 SPATA31C1P0DKV0 1188 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 KLRC1P26715 233 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 CDC25AP30304 524 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 PRPHP41219 470 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 CCL23P55773 120 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 PTK7Q13308 1070 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 TRIM71Q2Q1W2 868 aaKnown RBP17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 ZNF484Q5JVG2 852 aa17.01■□□□□ 0.31
SMARCD1-211ENST00000551497 MBLAC1A4D2B0 266 aaPredicted RBP17■□□□□ 0.31
SMARCD1-211ENST00000551497 VWA3AA6NCI4 1184 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 MED24O75448 989 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 BRD1O95696 1058 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 MAGEA10P43363 369 aaPredicted RBP17■□□□□ 0.31
SMARCD1-211ENST00000551497 GRIN1Q05586 938 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 PDIA5Q14554 519 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 TMEM266Q2M3C6 531 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 XKR3Q5GH77 459 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 MTHFD1LQ6UB35 978 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 ANO5Q75V66 913 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 CATSPER3Q86XQ3 398 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 ZNF579Q8NAF0 562 aaKnown RBP17■□□□□ 0.31
SMARCD1-211ENST00000551497 TNPO1Q92973 898 aaKnown RBP17■□□□□ 0.31
SMARCD1-211ENST00000551497 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 FAM167AQ96KS9 214 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 LXNQ9BS40 222 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 NIFKQ9BYG3 293 aaKnown RBP17■□□□□ 0.31
SMARCD1-211ENST00000551497 WNT8AQ9H1J5 351 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 LRWD1Q9UFC0 647 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
SMARCD1-211ENST00000551497 CKBP12277 381 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 MARCKSP29966 332 aaPredicted RBP16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 THPOP40225 353 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 NPEPPSP55786 919 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 TARBP2Q15633 366 aaKnown RBP16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 MTERF2Q49AM1 385 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 PLA2G4FQ68DD2 849 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 C4orf19Q8IY42 314 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 RETREG2Q8NC44 543 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 SCLYQ96I15 445 aa16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 LBHD1Q9BQE6 289 aaPredicted RBP16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 SEPT9Q9UHD8 586 aaPredicted RBP16.99■□□□□ 0.31
SMARCD1-211ENST00000551497 CEP290O15078 2479 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 EVPLQ92817 2033 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 IQCF3P0C7M6 154 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 CSF2RAP15509 400 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 DDIT3P35638 169 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 EPHB4P54760 987 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 BFSP2Q13515 415 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 ECM1Q16610 540 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 ZNF618Q5T7W0 954 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 ARL6IP4Q66PJ3 421 aaKnown RBP16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 MFSD5Q6N075 450 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 DNAJB3Q8WWF6 145 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 CEP89Q96ST8 783 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 MMTAG2Q9BU76 263 aaKnown RBP16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms