RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 BCAS3Q9H6U6 928 aa4.93□□□□□ -1.62
SCAF11-215ENST00000551391 KCNH7Q9NS40 1196 aa4.93□□□□□ -1.62
SCAF11-215ENST00000551391 A0A1B0GTL3 188 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 ZEB2O60315 1214 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 GAS7O60861 476 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 HIP1RO75146 1068 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 C4BPAP04003 597 aaKnown RBP4.92□□□□□ -1.62
SCAF11-215ENST00000551391 ATP2A2P16615 1042 aaKnown RBP4.92□□□□□ -1.62
SCAF11-215ENST00000551391 BPIP17213 487 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 SDHAP31040 664 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 OCRLQ01968 901 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 GRIN1Q05586 938 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 VWA3BQ502W6 1294 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 CREB3L3Q68CJ9 461 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 CC2D1AQ6P1N0 951 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-215ENST00000551391 SMC1BQ8NDV3 1235 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 ZCRB1Q8TBF4 217 aaKnown RBP4.92□□□□□ -1.62
SCAF11-215ENST00000551391 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.92□□□□□ -1.62
SCAF11-215ENST00000551391 ACSS2Q9NR19 701 aa4.92□□□□□ -1.62
SCAF11-215ENST00000551391 ZNF891A8MT65 544 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-215ENST00000551391 H7C1D1 291 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 SCDO00767 359 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 DVL2O14641 736 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 KCNK3O14649 394 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 BRINP1O60477 761 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 EYA4O95677 639 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 PLA2G1BP04054 148 aaKnown RBP4.91□□□□□ -1.62
SCAF11-215ENST00000551391 CYP17A1P05093 508 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 C8BP07358 591 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 CPEP16870 476 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 POU3F3P20264 500 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-215ENST00000551391 MAGEA10P43363 369 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-215ENST00000551391 LSSP48449 732 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 GJA9P57773 515 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 SART3Q15020 963 aaKnown RBP4.91□□□□□ -1.62
SCAF11-215ENST00000551391 SEC23AQ15436 765 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 CT47A1Q5JQC4 288 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-215ENST00000551391 FSTL4Q6MZW2 842 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 CD300LDQ6UXZ3 194 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 SAPCD2Q86UD0 394 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 NXPE1Q8N323 547 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 EFHBQ8N7U6 833 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 UBR7Q8N806 425 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 LINC00482Q8N8I6 264 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 ZNF526Q8TF50 670 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-215ENST00000551391 DDX11Q96FC9 970 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 RIC8BQ9NVN3 520 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 SPO11Q9Y5K1 396 aa4.91□□□□□ -1.62
SCAF11-215ENST00000551391 SH3D21A4FU49 640 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 ENO2P09104 434 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-215ENST00000551391 CYP2C8P10632 490 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 CNR2P34972 360 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 MC3RP41968 323 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 STAT5AP42229 794 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 FNTBP49356 437 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 AMPD3Q01432 767 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 DBPQ10586 325 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-215ENST00000551391 ZNF174Q15697 407 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 PTPROQ16827 1216 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 CD276Q5ZPR3 534 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 CPZQ66K79 652 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 STRA8Q7Z7C7 330 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 PROSER1Q86XN7 944 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 FAM26EQ8N5C1 309 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 SMARCC2Q8TAQ2 1214 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 USP7Q93009 1102 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 TTC1Q99614 292 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 IFT22Q9H7X7 185 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 OXSMQ9NWU1 459 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 SMPD4Q9NXE4 827 aa4.9□□□□□ -1.63
SCAF11-215ENST00000551391 FKBP9O95302 570 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 CNGA1P29973 690 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 ADCYAP1R1P41586 468 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 KPNA1P52294 538 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-215ENST00000551391 KIF11P52732 1056 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 HTRA3P83110 453 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 CATSPEREQ5SY80 951 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 GPR158Q5T848 1215 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 TTLL7Q6ZT98 887 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 FKBP9P1Q75LS8 142 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 PASD1Q8IV76 773 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 CARFQ8N187 725 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 KIAA1958Q8N8K9 716 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 CHTF18Q8WVB6 975 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 TMEM209Q96SK2 561 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 PCDH12Q9NPG4 1184 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 THG1LQ9NWX6 298 aaKnown RBP4.89□□□□□ -1.63
SCAF11-215ENST00000551391 WASF3Q9UPY6 502 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 ATP8A1Q9Y2Q0 1164 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 ASB1Q9Y576 335 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 COL4A3BPQ9Y5P4 624 aa4.89□□□□□ -1.63
SCAF11-215ENST00000551391 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-215ENST00000551391 PRAMEF25A6NGN4 478 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 RASSF10A6NK89 507 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 ZNF839A8K0R7 811 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 FOXP2O15409 715 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 NOBOXO60393 691 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 KRT37O76014 449 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 IBSPP21815 317 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-215ENST00000551391 AOAHP28039 575 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms